Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CXCL1P09341 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC13.17□□□□□ -0.3
CXCL1P09341 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC13.17□□□□□ -0.3
CXCL1P09341 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC13.17□□□□□ -0.3
CXCL1P09341 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC13.17□□□□□ -0.3
CXCL1P09341 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CXCL1P09341 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CXCL1P09341 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
CXCL1P09341 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
CXCL1P09341 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CXCL1P09341 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CXCL1P09341 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC13.17□□□□□ -0.3
CXCL1P09341 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CXCL1P09341 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CXCL1P09341 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CXCL1P09341 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC13.16□□□□□ -0.3
CXCL1P09341 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC13.16□□□□□ -0.3
CXCL1P09341 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CXCL1P09341 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CXCL1P09341 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CXCL1P09341 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC13.16□□□□□ -0.3
CXCL1P09341 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CXCL1P09341 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CXCL1P09341 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CXCL1P09341 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
CXCL1P09341 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
CXCL1P09341 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CXCL1P09341 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
CXCL1P09341 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC13.16□□□□□ -0.3
CXCL1P09341 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CXCL1P09341 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC13.16□□□□□ -0.3
CXCL1P09341 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC13.16□□□□□ -0.3
CXCL1P09341 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
CXCL1P09341 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CXCL1P09341 FAM197Y1-201ENST00000421178 764 ntBASIC13.16□□□□□ -0.3
CXCL1P09341 SLC25A1P2-201ENST00000430693 912 ntBASIC13.16□□□□□ -0.3
CXCL1P09341 PHB2-202ENST00000440277 996 ntTSL 5 BASIC13.16□□□□□ -0.3
CXCL1P09341 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC13.16□□□□□ -0.3
CXCL1P09341 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
CXCL1P09341 C1QBPP2-201ENST00000528754 825 ntBASIC13.16□□□□□ -0.3
CXCL1P09341 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC13.16□□□□□ -0.3
CXCL1P09341 ETFA-216ENST00000560726 942 ntTSL 3 BASIC13.16□□□□□ -0.3
CXCL1P09341 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CXCL1P09341 CR769767.2-201ENST00000622735 460 ntBASIC13.16□□□□□ -0.3
CXCL1P09341 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC13.16□□□□□ -0.3
CXCL1P09341 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
CXCL1P09341 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CXCL1P09341 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC13.16□□□□□ -0.3
CXCL1P09341 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CXCL1P09341 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CXCL1P09341 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
CXCL1P09341 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC13.16□□□□□ -0.3
CXCL1P09341 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CXCL1P09341 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
CXCL1P09341 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
CXCL1P09341 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
CXCL1P09341 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC13.15□□□□□ -0.3
CXCL1P09341 SUPT20HL2-201ENST00000486479 2409 ntBASIC13.15□□□□□ -0.3
CXCL1P09341 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CXCL1P09341 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CXCL1P09341 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CXCL1P09341 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CXCL1P09341 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CXCL1P09341 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CXCL1P09341 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
CXCL1P09341 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
CXCL1P09341 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
CXCL1P09341 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC13.15□□□□□ -0.3
CXCL1P09341 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC13.15□□□□□ -0.3
CXCL1P09341 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
CXCL1P09341 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
CXCL1P09341 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CXCL1P09341 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC13.15□□□□□ -0.3
CXCL1P09341 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CXCL1P09341 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC13.15□□□□□ -0.3
CXCL1P09341 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CXCL1P09341 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC13.15□□□□□ -0.3
CXCL1P09341 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC13.15□□□□□ -0.3
CXCL1P09341 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CXCL1P09341 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CXCL1P09341 ILF2-202ENST00000368681 726 ntTSL 2 BASIC13.15□□□□□ -0.3
CXCL1P09341 SAPCD2P4-201ENST00000424595 1171 ntBASIC13.15□□□□□ -0.3
CXCL1P09341 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CXCL1P09341 GRAMD4P1-201ENST00000435181 1110 ntBASIC13.15□□□□□ -0.3
CXCL1P09341 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
CXCL1P09341 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC13.15□□□□□ -0.3
CXCL1P09341 TSPY17P-201ENST00000450329 467 ntBASIC13.15□□□□□ -0.3
CXCL1P09341 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC13.15□□□□□ -0.3
CXCL1P09341 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC13.15□□□□□ -0.3
CXCL1P09341 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC13.15□□□□□ -0.3
CXCL1P09341 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC13.15□□□□□ -0.3
CXCL1P09341 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC13.15□□□□□ -0.3
CXCL1P09341 AC006058.3-201ENST00000606217 1069 ntBASIC13.15□□□□□ -0.3
CXCL1P09341 CD177P1-201ENST00000606252 935 ntBASIC13.15□□□□□ -0.3
CXCL1P09341 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC13.15□□□□□ -0.3
CXCL1P09341 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CXCL1P09341 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC13.15□□□□□ -0.3
CXCL1P09341 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC13.15□□□□□ -0.3
CXCL1P09341 AC015656.1-201ENST00000624209 3578 ntBASIC13.15□□□□□ -0.3
CXCL1P09341 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms