Protein–RNA interactions for Protein: P08684

CYP3A4, Cytochrome P450 3A4, humanhuman

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP3A4P08684 AMT-206ENST00000458307 1860 ntTSL 2 BASIC18.93■□□□□ 0.62
CYP3A4P08684 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
CYP3A4P08684 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC18.93■□□□□ 0.62
CYP3A4P08684 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CYP3A4P08684 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CYP3A4P08684 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CYP3A4P08684 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CYP3A4P08684 TFAMP1-201ENST00000412727 736 ntBASIC18.93■□□□□ 0.62
CYP3A4P08684 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC18.93■□□□□ 0.62
CYP3A4P08684 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC18.93■□□□□ 0.62
CYP3A4P08684 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC18.93■□□□□ 0.62
CYP3A4P08684 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC18.93■□□□□ 0.62
CYP3A4P08684 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC18.93■□□□□ 0.62
CYP3A4P08684 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CYP3A4P08684 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC18.93■□□□□ 0.62
CYP3A4P08684 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC18.93■□□□□ 0.62
CYP3A4P08684 AC026120.1-201ENST00000611536 926 ntBASIC18.93■□□□□ 0.62
CYP3A4P08684 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
CYP3A4P08684 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.93■□□□□ 0.62
CYP3A4P08684 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CYP3A4P08684 AC080080.1-201ENST00000625121 2420 ntBASIC18.93■□□□□ 0.62
CYP3A4P08684 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
CYP3A4P08684 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC18.93■□□□□ 0.62
CYP3A4P08684 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
CYP3A4P08684 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CYP3A4P08684 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CYP3A4P08684 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CYP3A4P08684 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CYP3A4P08684 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CYP3A4P08684 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CYP3A4P08684 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
CYP3A4P08684 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
CYP3A4P08684 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CYP3A4P08684 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
CYP3A4P08684 WASH6P-202ENST00000359512 1437 ntBASIC18.92■□□□□ 0.62
CYP3A4P08684 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CYP3A4P08684 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC18.92■□□□□ 0.62
CYP3A4P08684 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CYP3A4P08684 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC18.92■□□□□ 0.62
CYP3A4P08684 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
CYP3A4P08684 AL512652.2-201ENST00000625156 1716 ntBASIC18.92■□□□□ 0.62
CYP3A4P08684 AC078925.2-201ENST00000624013 1973 ntBASIC18.92■□□□□ 0.62
CYP3A4P08684 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
CYP3A4P08684 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
CYP3A4P08684 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC18.92■□□□□ 0.62
CYP3A4P08684 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CYP3A4P08684 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
CYP3A4P08684 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
CYP3A4P08684 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CYP3A4P08684 DNAJB3-202ENST00000449667 1266 ntBASIC18.92■□□□□ 0.62
CYP3A4P08684 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
CYP3A4P08684 HLA-J-202ENST00000469281 1241 ntBASIC18.92■□□□□ 0.62
CYP3A4P08684 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC18.92■□□□□ 0.62
CYP3A4P08684 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC18.92■□□□□ 0.62
CYP3A4P08684 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC18.92■□□□□ 0.62
CYP3A4P08684 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CYP3A4P08684 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
CYP3A4P08684 AP001160.2-201ENST00000596071 487 ntBASIC18.92■□□□□ 0.62
CYP3A4P08684 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC18.92■□□□□ 0.62
CYP3A4P08684 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CYP3A4P08684 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC18.92■□□□□ 0.62
CYP3A4P08684 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC18.92■□□□□ 0.62
CYP3A4P08684 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC18.92■□□□□ 0.62
CYP3A4P08684 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
CYP3A4P08684 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CYP3A4P08684 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CYP3A4P08684 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CYP3A4P08684 AL603756.1-201ENST00000606511 2163 ntBASIC18.92■□□□□ 0.62
CYP3A4P08684 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
CYP3A4P08684 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC18.92■□□□□ 0.62
CYP3A4P08684 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CYP3A4P08684 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC18.91■□□□□ 0.62
CYP3A4P08684 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC18.91■□□□□ 0.62
CYP3A4P08684 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
CYP3A4P08684 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC18.91■□□□□ 0.62
CYP3A4P08684 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC18.91■□□□□ 0.62
CYP3A4P08684 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CYP3A4P08684 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CYP3A4P08684 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC18.91■□□□□ 0.62
CYP3A4P08684 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
CYP3A4P08684 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC18.91■□□□□ 0.62
CYP3A4P08684 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
CYP3A4P08684 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
CYP3A4P08684 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CYP3A4P08684 AC006538.1-201ENST00000567905 1585 ntBASIC18.91■□□□□ 0.62
CYP3A4P08684 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
CYP3A4P08684 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CYP3A4P08684 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CYP3A4P08684 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CYP3A4P08684 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CYP3A4P08684 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC18.91■□□□□ 0.62
CYP3A4P08684 GATB-205ENST00000508611 605 ntTSL 2 BASIC18.91■□□□□ 0.62
CYP3A4P08684 AP000344.2-201ENST00000512987 629 ntBASIC18.91■□□□□ 0.62
CYP3A4P08684 KRT8P48-201ENST00000515599 1220 ntBASIC18.91■□□□□ 0.62
CYP3A4P08684 CCND1-203ENST00000536559 553 ntTSL 3 BASIC18.91■□□□□ 0.62
CYP3A4P08684 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CYP3A4P08684 AC243562.1-201ENST00000560672 389 ntBASIC18.91■□□□□ 0.62
CYP3A4P08684 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC18.91■□□□□ 0.62
CYP3A4P08684 AC022145.2-201ENST00000598203 171 ntBASIC18.91■□□□□ 0.62
CYP3A4P08684 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms