Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
VTNP04004 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC18.47■□□□□ 0.55
VTNP04004 PMS2P4-201ENST00000412466 1052 ntBASIC18.47■□□□□ 0.55
VTNP04004 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
VTNP04004 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC18.47■□□□□ 0.55
VTNP04004 SLBP-205ENST00000488267 987 ntTSL 2 BASIC18.47■□□□□ 0.55
VTNP04004 IGHV3-62-201ENST00000520057 340 ntBASIC18.47■□□□□ 0.55
VTNP04004 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC18.47■□□□□ 0.55
VTNP04004 AC124947.2-201ENST00000547118 1133 ntBASIC18.47■□□□□ 0.55
VTNP04004 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
VTNP04004 LINC01225-203ENST00000563550 1244 ntBASIC18.47■□□□□ 0.55
VTNP04004 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC18.47■□□□□ 0.55
VTNP04004 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC18.47■□□□□ 0.55
VTNP04004 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
VTNP04004 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC18.47■□□□□ 0.55
VTNP04004 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC18.47■□□□□ 0.55
VTNP04004 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC18.47■□□□□ 0.55
VTNP04004 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
VTNP04004 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
VTNP04004 UXT-AS1-201ENST00000590504 1525 ntBASIC18.47■□□□□ 0.55
VTNP04004 BANP-227ENST00000626016 2144 ntTSL 2 BASIC18.47■□□□□ 0.55
VTNP04004 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
VTNP04004 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
VTNP04004 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
VTNP04004 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
VTNP04004 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
VTNP04004 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
VTNP04004 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
VTNP04004 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
VTNP04004 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC18.47■□□□□ 0.55
VTNP04004 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC18.47■□□□□ 0.55
VTNP04004 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
VTNP04004 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
VTNP04004 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC18.46■□□□□ 0.55
VTNP04004 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC18.46■□□□□ 0.55
VTNP04004 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
VTNP04004 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
VTNP04004 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
VTNP04004 SLC9A3P2-201ENST00000447821 2021 ntBASIC18.46■□□□□ 0.55
VTNP04004 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
VTNP04004 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
VTNP04004 MIR770-201ENST00000390219 98 ntBASIC18.46■□□□□ 0.55
VTNP04004 HLA-DRB6-201ENST00000411500 1235 ntBASIC18.46■□□□□ 0.55
VTNP04004 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC18.46■□□□□ 0.55
VTNP04004 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC18.46■□□□□ 0.55
VTNP04004 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC18.46■□□□□ 0.55
VTNP04004 Z92544.3-201ENST00000624747 417 ntBASIC18.46■□□□□ 0.55
VTNP04004 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
VTNP04004 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC18.46■□□□□ 0.55
VTNP04004 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
VTNP04004 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
VTNP04004 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
VTNP04004 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
VTNP04004 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
VTNP04004 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
VTNP04004 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.54
VTNP04004 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
VTNP04004 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC18.45■□□□□ 0.54
VTNP04004 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
VTNP04004 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
VTNP04004 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
VTNP04004 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC18.45■□□□□ 0.54
VTNP04004 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
VTNP04004 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
VTNP04004 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
VTNP04004 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
VTNP04004 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC18.45■□□□□ 0.54
VTNP04004 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
VTNP04004 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
VTNP04004 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC18.45■□□□□ 0.54
VTNP04004 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
VTNP04004 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC18.45■□□□□ 0.54
VTNP04004 GPS2P2-201ENST00000430745 888 ntBASIC18.45■□□□□ 0.54
VTNP04004 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
VTNP04004 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC18.45■□□□□ 0.54
VTNP04004 MIR3909-201ENST00000579518 119 ntBASIC18.45■□□□□ 0.54
VTNP04004 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC18.45■□□□□ 0.54
VTNP04004 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
VTNP04004 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC18.45■□□□□ 0.54
VTNP04004 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC18.45■□□□□ 0.54
VTNP04004 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
VTNP04004 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
VTNP04004 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC18.45■□□□□ 0.54
VTNP04004 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
VTNP04004 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
VTNP04004 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
VTNP04004 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
VTNP04004 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
VTNP04004 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
VTNP04004 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
VTNP04004 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
VTNP04004 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
VTNP04004 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC18.44■□□□□ 0.54
VTNP04004 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC18.44■□□□□ 0.54
VTNP04004 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
VTNP04004 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
VTNP04004 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
VTNP04004 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
VTNP04004 RBPMS2P1-201ENST00000437762 623 ntBASIC18.44■□□□□ 0.54
VTNP04004 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms