Protein–RNA interactions for Protein: O95741

CPNE6, Copine-6, humanhuman

Predictions only

Length 557 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6O95741 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CPNE6O95741 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CPNE6O95741 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC16.65■□□□□ 0.26
CPNE6O95741 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CPNE6O95741 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC16.65■□□□□ 0.26
CPNE6O95741 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.26
CPNE6O95741 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.26
CPNE6O95741 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
CPNE6O95741 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CPNE6O95741 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CPNE6O95741 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CPNE6O95741 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CPNE6O95741 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC16.64■□□□□ 0.25
CPNE6O95741 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CPNE6O95741 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CPNE6O95741 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC16.64■□□□□ 0.25
CPNE6O95741 AC046185.3-201ENST00000623228 1824 ntBASIC16.64■□□□□ 0.25
CPNE6O95741 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
CPNE6O95741 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CPNE6O95741 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CPNE6O95741 AC254562.1-201ENST00000417586 456 ntBASIC16.64■□□□□ 0.25
CPNE6O95741 RHOQP3-201ENST00000437982 621 ntBASIC16.64■□□□□ 0.25
CPNE6O95741 SMN2-210ENST00000511812 867 ntTSL 2 BASIC16.64■□□□□ 0.25
CPNE6O95741 CFL1-202ENST00000524553 860 ntTSL 2 BASIC16.64■□□□□ 0.25
CPNE6O95741 POLD4-207ENST00000531239 584 ntTSL 2 BASIC16.64■□□□□ 0.25
CPNE6O95741 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC16.64■□□□□ 0.25
CPNE6O95741 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC16.64■□□□□ 0.25
CPNE6O95741 OR7E47P-204ENST00000575924 449 ntBASIC16.64■□□□□ 0.25
CPNE6O95741 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC16.64■□□□□ 0.25
CPNE6O95741 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC16.64■□□□□ 0.25
CPNE6O95741 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC16.64■□□□□ 0.25
CPNE6O95741 AL596442.2-201ENST00000610240 980 ntBASIC16.64■□□□□ 0.25
CPNE6O95741 AQP6-205ENST00000618286 829 ntTSL 5 BASIC16.64■□□□□ 0.25
CPNE6O95741 AC007064.4-201ENST00000637740 555 ntBASIC16.64■□□□□ 0.25
CPNE6O95741 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CPNE6O95741 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CPNE6O95741 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CPNE6O95741 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CPNE6O95741 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CPNE6O95741 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CPNE6O95741 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.64■□□□□ 0.25
CPNE6O95741 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CPNE6O95741 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
CPNE6O95741 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC16.64■□□□□ 0.25
CPNE6O95741 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CPNE6O95741 BCAR1-209ENST00000546196 1340 ntBASIC16.64■□□□□ 0.25
CPNE6O95741 AL590787.1-201ENST00000568856 1315 ntBASIC16.64■□□□□ 0.25
CPNE6O95741 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
CPNE6O95741 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
CPNE6O95741 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CPNE6O95741 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
CPNE6O95741 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CPNE6O95741 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
CPNE6O95741 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CPNE6O95741 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CPNE6O95741 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
CPNE6O95741 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CPNE6O95741 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CPNE6O95741 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CPNE6O95741 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CPNE6O95741 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
CPNE6O95741 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
CPNE6O95741 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
CPNE6O95741 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CPNE6O95741 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CPNE6O95741 AGGF1P2-201ENST00000426656 2106 ntBASIC16.63■□□□□ 0.25
CPNE6O95741 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC16.63■□□□□ 0.25
CPNE6O95741 PC-214ENST00000628663 1470 ntTSL 5 BASIC16.63■□□□□ 0.25
CPNE6O95741 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CPNE6O95741 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CPNE6O95741 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CPNE6O95741 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CPNE6O95741 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC16.63■□□□□ 0.25
CPNE6O95741 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC16.63■□□□□ 0.25
CPNE6O95741 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC16.63■□□□□ 0.25
CPNE6O95741 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC16.63■□□□□ 0.25
CPNE6O95741 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC16.63■□□□□ 0.25
CPNE6O95741 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC16.63■□□□□ 0.25
CPNE6O95741 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC16.63■□□□□ 0.25
CPNE6O95741 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CPNE6O95741 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CPNE6O95741 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CPNE6O95741 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CPNE6O95741 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CPNE6O95741 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CPNE6O95741 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC16.63■□□□□ 0.25
CPNE6O95741 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CPNE6O95741 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CPNE6O95741 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CPNE6O95741 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CPNE6O95741 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CPNE6O95741 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC16.62■□□□□ 0.25
CPNE6O95741 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
CPNE6O95741 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CPNE6O95741 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC16.62■□□□□ 0.25
CPNE6O95741 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CPNE6O95741 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC16.62■□□□□ 0.25
CPNE6O95741 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
CPNE6O95741 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC16.62■□□□□ 0.25
CPNE6O95741 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms