Protein–RNA interactions for Protein: O95170

CDRT1, CMT1A duplicated region transcript 1 protein, humanhuman

Predictions only

Length 752 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1O95170 AL391807.1-203ENST00000604392 2365 ntBASIC15.16■□□□□ 0.02
CDRT1O95170 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC15.16■□□□□ 0.02
CDRT1O95170 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
CDRT1O95170 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDRT1O95170 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC15.15■□□□□ 0.02
CDRT1O95170 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC15.15■□□□□ 0.02
CDRT1O95170 EGFEM1P-202ENST00000431685 1563 ntBASIC15.15■□□□□ 0.02
CDRT1O95170 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
CDRT1O95170 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDRT1O95170 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDRT1O95170 KRT89P-201ENST00000620027 1478 ntBASIC15.15■□□□□ 0.02
CDRT1O95170 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
CDRT1O95170 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC15.15■□□□□ 0.02
CDRT1O95170 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDRT1O95170 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
CDRT1O95170 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDRT1O95170 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDRT1O95170 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDRT1O95170 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC15.15■□□□□ 0.02
CDRT1O95170 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CDRT1O95170 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CDRT1O95170 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CDRT1O95170 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC15.15■□□□□ 0.02
CDRT1O95170 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
CDRT1O95170 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC15.15■□□□□ 0.02
CDRT1O95170 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC15.15■□□□□ 0.02
CDRT1O95170 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC15.15■□□□□ 0.02
CDRT1O95170 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC15.15■□□□□ 0.02
CDRT1O95170 AL136038.4-201ENST00000603606 1261 ntBASIC15.15■□□□□ 0.02
CDRT1O95170 AC140113.3-201ENST00000605663 199 ntBASIC15.15■□□□□ 0.02
CDRT1O95170 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDRT1O95170 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC15.15■□□□□ 0.02
CDRT1O95170 AC004263.2-201ENST00000617183 678 ntBASIC15.15■□□□□ 0.02
CDRT1O95170 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDRT1O95170 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDRT1O95170 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDRT1O95170 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDRT1O95170 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDRT1O95170 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC15.15■□□□□ 0.02
CDRT1O95170 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
CDRT1O95170 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC15.15■□□□□ 0.02
CDRT1O95170 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC15.15■□□□□ 0.02
CDRT1O95170 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDRT1O95170 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDRT1O95170 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDRT1O95170 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDRT1O95170 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDRT1O95170 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDRT1O95170 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
CDRT1O95170 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDRT1O95170 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
CDRT1O95170 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CDRT1O95170 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDRT1O95170 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDRT1O95170 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDRT1O95170 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDRT1O95170 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CDRT1O95170 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDRT1O95170 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDRT1O95170 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDRT1O95170 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC15.14■□□□□ 0.01
CDRT1O95170 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC15.14■□□□□ 0.01
CDRT1O95170 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
CDRT1O95170 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDRT1O95170 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC15.14■□□□□ 0.01
CDRT1O95170 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDRT1O95170 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDRT1O95170 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CDRT1O95170 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
CDRT1O95170 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CDRT1O95170 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC15.14■□□□□ 0.01
CDRT1O95170 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CDRT1O95170 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC15.14■□□□□ 0.01
CDRT1O95170 TEN1-204ENST00000588202 862 ntTSL 3 BASIC15.14■□□□□ 0.01
CDRT1O95170 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
CDRT1O95170 AC009154.2-201ENST00000621177 724 ntBASIC15.14■□□□□ 0.01
CDRT1O95170 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
CDRT1O95170 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDRT1O95170 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CDRT1O95170 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDRT1O95170 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
CDRT1O95170 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDRT1O95170 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC15.14■□□□□ 0.01
CDRT1O95170 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC15.14■□□□□ 0.01
CDRT1O95170 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC15.14■□□□□ 0.01
CDRT1O95170 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDRT1O95170 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
CDRT1O95170 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDRT1O95170 AC006538.1-201ENST00000567905 1585 ntBASIC15.14■□□□□ 0.01
CDRT1O95170 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDRT1O95170 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC15.14■□□□□ 0.01
CDRT1O95170 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDRT1O95170 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDRT1O95170 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
CDRT1O95170 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDRT1O95170 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC15.14■□□□□ 0.01
CDRT1O95170 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CDRT1O95170 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC15.14■□□□□ 0.01
CDRT1O95170 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDRT1O95170 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 66 ms