Protein–RNA interactions for Protein: O60637

TSPAN3, Tetraspanin-3, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3O60637 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
TSPAN3O60637 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TSPAN3O60637 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TSPAN3O60637 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TSPAN3O60637 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TSPAN3O60637 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TSPAN3O60637 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC17.42■□□□□ 0.38
TSPAN3O60637 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
TSPAN3O60637 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TSPAN3O60637 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.42■□□□□ 0.38
TSPAN3O60637 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TSPAN3O60637 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TSPAN3O60637 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC17.42■□□□□ 0.38
TSPAN3O60637 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC17.42■□□□□ 0.38
TSPAN3O60637 YBX1P5-201ENST00000509441 847 ntBASIC17.42■□□□□ 0.38
TSPAN3O60637 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC17.42■□□□□ 0.38
TSPAN3O60637 AC005412.3-201ENST00000580309 715 ntBASIC17.42■□□□□ 0.38
TSPAN3O60637 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC17.42■□□□□ 0.38
TSPAN3O60637 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TSPAN3O60637 ELL2P1-201ENST00000413990 1906 ntBASIC17.42■□□□□ 0.38
TSPAN3O60637 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.42■□□□□ 0.38
TSPAN3O60637 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TSPAN3O60637 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
TSPAN3O60637 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC17.42■□□□□ 0.38
TSPAN3O60637 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TSPAN3O60637 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC17.42■□□□□ 0.38
TSPAN3O60637 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TSPAN3O60637 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.42■□□□□ 0.38
TSPAN3O60637 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
TSPAN3O60637 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TSPAN3O60637 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TSPAN3O60637 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC17.42■□□□□ 0.38
TSPAN3O60637 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
TSPAN3O60637 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
TSPAN3O60637 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
TSPAN3O60637 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
TSPAN3O60637 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TSPAN3O60637 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TSPAN3O60637 AC012569.1-201ENST00000591191 1524 ntBASIC17.42■□□□□ 0.38
TSPAN3O60637 TOP3BP1-201ENST00000420768 1380 ntBASIC17.41■□□□□ 0.38
TSPAN3O60637 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
TSPAN3O60637 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TSPAN3O60637 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TSPAN3O60637 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TSPAN3O60637 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
TSPAN3O60637 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
TSPAN3O60637 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TSPAN3O60637 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TSPAN3O60637 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TSPAN3O60637 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TSPAN3O60637 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TSPAN3O60637 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TSPAN3O60637 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TSPAN3O60637 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TSPAN3O60637 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TSPAN3O60637 HMGA1P7-201ENST00000406908 502 ntBASIC17.41■□□□□ 0.38
TSPAN3O60637 GGCT-205ENST00000409436 954 ntTSL 3 BASIC17.41■□□□□ 0.38
TSPAN3O60637 MKNK2P1-201ENST00000437526 628 ntBASIC17.41■□□□□ 0.38
TSPAN3O60637 URGCP-206ENST00000446958 365 ntTSL 2 BASIC17.41■□□□□ 0.38
TSPAN3O60637 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC17.41■□□□□ 0.38
TSPAN3O60637 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TSPAN3O60637 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC17.41■□□□□ 0.38
TSPAN3O60637 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TSPAN3O60637 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC17.41■□□□□ 0.38
TSPAN3O60637 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC17.41■□□□□ 0.38
TSPAN3O60637 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC17.41■□□□□ 0.38
TSPAN3O60637 AC092902.6-201ENST00000641783 218 ntBASIC17.41■□□□□ 0.38
TSPAN3O60637 AL645728.2-201ENST00000641974 660 ntBASIC17.41■□□□□ 0.38
TSPAN3O60637 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TSPAN3O60637 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC17.41■□□□□ 0.38
TSPAN3O60637 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
TSPAN3O60637 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TSPAN3O60637 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TSPAN3O60637 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
TSPAN3O60637 SLC22A20-204ENST00000530038 1673 ntBASIC17.41■□□□□ 0.38
TSPAN3O60637 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC17.41■□□□□ 0.38
TSPAN3O60637 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
TSPAN3O60637 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TSPAN3O60637 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC17.41■□□□□ 0.38
TSPAN3O60637 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TSPAN3O60637 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
TSPAN3O60637 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TSPAN3O60637 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TSPAN3O60637 AL021920.2-201ENST00000624828 1351 ntBASIC17.4■□□□□ 0.38
TSPAN3O60637 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TSPAN3O60637 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
TSPAN3O60637 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TSPAN3O60637 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TSPAN3O60637 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.4■□□□□ 0.38
TSPAN3O60637 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TSPAN3O60637 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC17.4■□□□□ 0.38
TSPAN3O60637 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
TSPAN3O60637 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
TSPAN3O60637 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TSPAN3O60637 AL353732.1-201ENST00000569618 1459 ntBASIC17.4■□□□□ 0.38
TSPAN3O60637 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC17.4■□□□□ 0.38
TSPAN3O60637 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC17.4■□□□□ 0.38
TSPAN3O60637 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC17.4■□□□□ 0.38
TSPAN3O60637 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC17.4■□□□□ 0.38
TSPAN3O60637 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms