Protein–RNA interactions for Protein: O60245

PCDH7, Protocadherin-7, humanhuman

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7O60245 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDH7O60245 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDH7O60245 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PCDH7O60245 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
PCDH7O60245 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDH7O60245 KRT8P49-201ENST00000604166 1432 ntBASIC16.19■□□□□ 0.18
PCDH7O60245 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDH7O60245 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
PCDH7O60245 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
PCDH7O60245 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC16.18■□□□□ 0.18
PCDH7O60245 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PCDH7O60245 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
PCDH7O60245 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDH7O60245 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PCDH7O60245 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PCDH7O60245 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC16.18■□□□□ 0.18
PCDH7O60245 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC16.18■□□□□ 0.18
PCDH7O60245 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDH7O60245 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDH7O60245 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC16.18■□□□□ 0.18
PCDH7O60245 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDH7O60245 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC16.18■□□□□ 0.18
PCDH7O60245 AC079328.2-201ENST00000561241 3354 ntBASIC16.18■□□□□ 0.18
PCDH7O60245 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDH7O60245 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDH7O60245 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDH7O60245 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
PCDH7O60245 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC16.18■□□□□ 0.18
PCDH7O60245 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC16.18■□□□□ 0.18
PCDH7O60245 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC16.18■□□□□ 0.18
PCDH7O60245 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC16.18■□□□□ 0.18
PCDH7O60245 TBCB-205ENST00000585746 875 ntTSL 3 BASIC16.18■□□□□ 0.18
PCDH7O60245 IFNL4P1-201ENST00000607083 540 ntBASIC16.18■□□□□ 0.18
PCDH7O60245 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC16.18■□□□□ 0.18
PCDH7O60245 AC004706.3-202ENST00000621574 984 ntBASIC16.18■□□□□ 0.18
PCDH7O60245 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDH7O60245 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDH7O60245 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PCDH7O60245 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
PCDH7O60245 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDH7O60245 HLA-A-202ENST00000376806 1854 ntBASIC16.18■□□□□ 0.18
PCDH7O60245 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16.18■□□□□ 0.18
PCDH7O60245 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PCDH7O60245 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDH7O60245 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDH7O60245 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC16.17■□□□□ 0.18
PCDH7O60245 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
PCDH7O60245 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC16.17■□□□□ 0.18
PCDH7O60245 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC16.17■□□□□ 0.18
PCDH7O60245 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC16.17■□□□□ 0.18
PCDH7O60245 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
PCDH7O60245 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDH7O60245 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDH7O60245 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC16.17■□□□□ 0.18
PCDH7O60245 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
PCDH7O60245 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDH7O60245 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC16.17■□□□□ 0.18
PCDH7O60245 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PCDH7O60245 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDH7O60245 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDH7O60245 HIST2H3DP1-201ENST00000401004 416 ntBASIC16.17■□□□□ 0.18
PCDH7O60245 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC16.17■□□□□ 0.18
PCDH7O60245 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
PCDH7O60245 AF238378.1-201ENST00000526806 358 ntBASIC16.17■□□□□ 0.18
PCDH7O60245 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
PCDH7O60245 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC16.17■□□□□ 0.18
PCDH7O60245 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC16.17■□□□□ 0.18
PCDH7O60245 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC16.17■□□□□ 0.18
PCDH7O60245 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
PCDH7O60245 AC025062.2-201ENST00000605477 670 ntBASIC16.17■□□□□ 0.18
PCDH7O60245 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC16.17■□□□□ 0.18
PCDH7O60245 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDH7O60245 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDH7O60245 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC16.17■□□□□ 0.18
PCDH7O60245 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PCDH7O60245 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC16.16■□□□□ 0.18
PCDH7O60245 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDH7O60245 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC16.16■□□□□ 0.18
PCDH7O60245 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDH7O60245 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDH7O60245 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDH7O60245 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC16.16■□□□□ 0.18
PCDH7O60245 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC16.16■□□□□ 0.18
PCDH7O60245 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC16.16■□□□□ 0.18
PCDH7O60245 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC16.16■□□□□ 0.18
PCDH7O60245 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDH7O60245 RAB17-203ENST00000409576 466 ntTSL 3 BASIC16.16■□□□□ 0.18
PCDH7O60245 ARTN-206ENST00000472435 402 ntTSL 3 BASIC16.16■□□□□ 0.18
PCDH7O60245 KRT18P56-201ENST00000507275 550 ntBASIC16.16■□□□□ 0.18
PCDH7O60245 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDH7O60245 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
PCDH7O60245 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDH7O60245 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
PCDH7O60245 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDH7O60245 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDH7O60245 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC16.16■□□□□ 0.18
PCDH7O60245 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PCDH7O60245 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PCDH7O60245 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDH7O60245 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms