Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
RNF103-CHMP3A0A140T963 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RNF103-CHMP3A0A140T963 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.22
RNF103-CHMP3A0A140T963 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.39■□□□□ 0.22
RNF103-CHMP3A0A140T963 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC16.39■□□□□ 0.22
RNF103-CHMP3A0A140T963 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.22
RNF103-CHMP3A0A140T963 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RNF103-CHMP3A0A140T963 RNF216P1-203ENST00000404404 2427 ntBASIC16.39■□□□□ 0.21
RNF103-CHMP3A0A140T963 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
RNF103-CHMP3A0A140T963 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
RNF103-CHMP3A0A140T963 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RNF103-CHMP3A0A140T963 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.39■□□□□ 0.21
RNF103-CHMP3A0A140T963 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RNF103-CHMP3A0A140T963 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
RNF103-CHMP3A0A140T963 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
RNF103-CHMP3A0A140T963 AL662844.4-201ENST00000606367 2838 ntBASIC16.39■□□□□ 0.21
RNF103-CHMP3A0A140T963 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RNF103-CHMP3A0A140T963 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC16.39■□□□□ 0.21
RNF103-CHMP3A0A140T963 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
RNF103-CHMP3A0A140T963 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RNF103-CHMP3A0A140T963 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RNF103-CHMP3A0A140T963 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RNF103-CHMP3A0A140T963 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC16.39■□□□□ 0.21
RNF103-CHMP3A0A140T963 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RNF103-CHMP3A0A140T963 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RNF103-CHMP3A0A140T963 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RNF103-CHMP3A0A140T963 FAM220CP-201ENST00000395253 831 ntBASIC16.39■□□□□ 0.21
RNF103-CHMP3A0A140T963 AL031133.1-201ENST00000406807 723 ntBASIC16.39■□□□□ 0.21
RNF103-CHMP3A0A140T963 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC16.39■□□□□ 0.21
RNF103-CHMP3A0A140T963 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC16.39■□□□□ 0.21
RNF103-CHMP3A0A140T963 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RNF103-CHMP3A0A140T963 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC16.39■□□□□ 0.21
RNF103-CHMP3A0A140T963 AC111152.3-201ENST00000569699 673 ntBASIC16.39■□□□□ 0.21
RNF103-CHMP3A0A140T963 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC16.39■□□□□ 0.21
RNF103-CHMP3A0A140T963 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC16.39■□□□□ 0.21
RNF103-CHMP3A0A140T963 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
RNF103-CHMP3A0A140T963 AC046185.3-201ENST00000623228 1824 ntBASIC16.39■□□□□ 0.21
RNF103-CHMP3A0A140T963 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
RNF103-CHMP3A0A140T963 AC092068.3-201ENST00000587894 2016 ntBASIC16.39■□□□□ 0.21
RNF103-CHMP3A0A140T963 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
RNF103-CHMP3A0A140T963 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RNF103-CHMP3A0A140T963 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC16.39■□□□□ 0.21
RNF103-CHMP3A0A140T963 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC16.39■□□□□ 0.21
RNF103-CHMP3A0A140T963 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RNF103-CHMP3A0A140T963 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RNF103-CHMP3A0A140T963 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.39■□□□□ 0.21
RNF103-CHMP3A0A140T963 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RNF103-CHMP3A0A140T963 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC16.39■□□□□ 0.21
RNF103-CHMP3A0A140T963 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC16.39■□□□□ 0.21
RNF103-CHMP3A0A140T963 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RNF103-CHMP3A0A140T963 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RNF103-CHMP3A0A140T963 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RNF103-CHMP3A0A140T963 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
RNF103-CHMP3A0A140T963 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RNF103-CHMP3A0A140T963 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
RNF103-CHMP3A0A140T963 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RNF103-CHMP3A0A140T963 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RNF103-CHMP3A0A140T963 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
RNF103-CHMP3A0A140T963 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RNF103-CHMP3A0A140T963 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC16.38■□□□□ 0.21
RNF103-CHMP3A0A140T963 AC246785.2-201ENST00000432512 513 ntBASIC16.38■□□□□ 0.21
RNF103-CHMP3A0A140T963 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RNF103-CHMP3A0A140T963 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RNF103-CHMP3A0A140T963 MEG3-211ENST00000452514 461 ntTSL 3 BASIC16.38■□□□□ 0.21
RNF103-CHMP3A0A140T963 BX276092.5-203ENST00000456199 560 ntBASIC16.38■□□□□ 0.21
RNF103-CHMP3A0A140T963 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RNF103-CHMP3A0A140T963 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC16.38■□□□□ 0.21
RNF103-CHMP3A0A140T963 VENTXP7-201ENST00000475503 772 ntBASIC16.38■□□□□ 0.21
RNF103-CHMP3A0A140T963 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RNF103-CHMP3A0A140T963 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
RNF103-CHMP3A0A140T963 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC16.38■□□□□ 0.21
RNF103-CHMP3A0A140T963 AC093525.9-201ENST00000624961 1746 ntBASIC16.38■□□□□ 0.21
RNF103-CHMP3A0A140T963 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RNF103-CHMP3A0A140T963 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RNF103-CHMP3A0A140T963 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC16.38■□□□□ 0.21
RNF103-CHMP3A0A140T963 AC005332.1-201ENST00000577698 1310 ntBASIC16.38■□□□□ 0.21
RNF103-CHMP3A0A140T963 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC16.38■□□□□ 0.21
RNF103-CHMP3A0A140T963 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RNF103-CHMP3A0A140T963 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC16.38■□□□□ 0.21
RNF103-CHMP3A0A140T963 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RNF103-CHMP3A0A140T963 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RNF103-CHMP3A0A140T963 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
RNF103-CHMP3A0A140T963 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
RNF103-CHMP3A0A140T963 CYP2T1P-202ENST00000641596 2535 ntBASIC16.38■□□□□ 0.21
RNF103-CHMP3A0A140T963 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
RNF103-CHMP3A0A140T963 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
RNF103-CHMP3A0A140T963 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
RNF103-CHMP3A0A140T963 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
RNF103-CHMP3A0A140T963 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.37■□□□□ 0.21
RNF103-CHMP3A0A140T963 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
RNF103-CHMP3A0A140T963 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
RNF103-CHMP3A0A140T963 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC16.37■□□□□ 0.21
RNF103-CHMP3A0A140T963 LINC02012-201ENST00000608206 1725 ntBASIC16.37■□□□□ 0.21
RNF103-CHMP3A0A140T963 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RNF103-CHMP3A0A140T963 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RNF103-CHMP3A0A140T963 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RNF103-CHMP3A0A140T963 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
RNF103-CHMP3A0A140T963 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.37■□□□□ 0.21
RNF103-CHMP3A0A140T963 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RNF103-CHMP3A0A140T963 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms