Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC16.56■□□□□ 0.24
CSNK1G3Q9Y6M4 AC109322.1-201ENST00000524499 1264 ntBASIC16.56■□□□□ 0.24
CSNK1G3Q9Y6M4 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CSNK1G3Q9Y6M4 AC093520.2-201ENST00000561830 333 ntBASIC16.56■□□□□ 0.24
CSNK1G3Q9Y6M4 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC16.56■□□□□ 0.24
CSNK1G3Q9Y6M4 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC16.56■□□□□ 0.24
CSNK1G3Q9Y6M4 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CSNK1G3Q9Y6M4 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
CSNK1G3Q9Y6M4 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
CSNK1G3Q9Y6M4 AC139713.2-201ENST00000641328 2723 ntBASIC16.56■□□□□ 0.24
CSNK1G3Q9Y6M4 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CSNK1G3Q9Y6M4 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.56■□□□□ 0.24
CSNK1G3Q9Y6M4 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.56■□□□□ 0.24
CSNK1G3Q9Y6M4 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CSNK1G3Q9Y6M4 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
CSNK1G3Q9Y6M4 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CSNK1G3Q9Y6M4 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
CSNK1G3Q9Y6M4 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CSNK1G3Q9Y6M4 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
CSNK1G3Q9Y6M4 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CSNK1G3Q9Y6M4 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
CSNK1G3Q9Y6M4 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CSNK1G3Q9Y6M4 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
CSNK1G3Q9Y6M4 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
CSNK1G3Q9Y6M4 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CSNK1G3Q9Y6M4 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
CSNK1G3Q9Y6M4 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC16.55■□□□□ 0.24
CSNK1G3Q9Y6M4 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CSNK1G3Q9Y6M4 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC16.55■□□□□ 0.24
CSNK1G3Q9Y6M4 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CSNK1G3Q9Y6M4 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CSNK1G3Q9Y6M4 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC16.55■□□□□ 0.24
CSNK1G3Q9Y6M4 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC16.55■□□□□ 0.24
CSNK1G3Q9Y6M4 HCG4-201ENST00000418983 998 ntBASIC16.55■□□□□ 0.24
CSNK1G3Q9Y6M4 FAM8A3P-201ENST00000427218 844 ntBASIC16.55■□□□□ 0.24
CSNK1G3Q9Y6M4 AL592309.1-201ENST00000443127 649 ntBASIC16.55■□□□□ 0.24
CSNK1G3Q9Y6M4 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC16.55■□□□□ 0.24
CSNK1G3Q9Y6M4 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC16.55■□□□□ 0.24
CSNK1G3Q9Y6M4 AC067863.1-201ENST00000494933 530 ntBASIC16.55■□□□□ 0.24
CSNK1G3Q9Y6M4 AC079140.1-201ENST00000508039 487 ntBASIC16.55■□□□□ 0.24
CSNK1G3Q9Y6M4 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC16.55■□□□□ 0.24
CSNK1G3Q9Y6M4 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC16.55■□□□□ 0.24
CSNK1G3Q9Y6M4 TSFM-210ENST00000550559 897 ntTSL 5 BASIC16.55■□□□□ 0.24
CSNK1G3Q9Y6M4 CD7-202ENST00000578509 925 ntTSL 3 BASIC16.55■□□□□ 0.24
CSNK1G3Q9Y6M4 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC16.55■□□□□ 0.24
CSNK1G3Q9Y6M4 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC16.55■□□□□ 0.24
CSNK1G3Q9Y6M4 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CSNK1G3Q9Y6M4 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC16.55■□□□□ 0.24
CSNK1G3Q9Y6M4 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CSNK1G3Q9Y6M4 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
CSNK1G3Q9Y6M4 FST-202ENST00000396947 2538 ntTSL 5 BASIC16.55■□□□□ 0.24
CSNK1G3Q9Y6M4 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
CSNK1G3Q9Y6M4 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CSNK1G3Q9Y6M4 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CSNK1G3Q9Y6M4 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.54■□□□□ 0.24
CSNK1G3Q9Y6M4 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CSNK1G3Q9Y6M4 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CSNK1G3Q9Y6M4 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CSNK1G3Q9Y6M4 AC016396.2-201ENST00000562575 1417 ntBASIC16.54■□□□□ 0.24
CSNK1G3Q9Y6M4 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
CSNK1G3Q9Y6M4 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CSNK1G3Q9Y6M4 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
CSNK1G3Q9Y6M4 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC16.54■□□□□ 0.24
CSNK1G3Q9Y6M4 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.54■□□□□ 0.24
CSNK1G3Q9Y6M4 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CSNK1G3Q9Y6M4 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CSNK1G3Q9Y6M4 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
CSNK1G3Q9Y6M4 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CSNK1G3Q9Y6M4 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
CSNK1G3Q9Y6M4 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CSNK1G3Q9Y6M4 FAM86GP-201ENST00000448322 971 ntBASIC16.54■□□□□ 0.24
CSNK1G3Q9Y6M4 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CSNK1G3Q9Y6M4 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC16.54■□□□□ 0.24
CSNK1G3Q9Y6M4 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CSNK1G3Q9Y6M4 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CSNK1G3Q9Y6M4 AC109635.5-201ENST00000533593 962 ntBASIC16.54■□□□□ 0.24
CSNK1G3Q9Y6M4 AC243562.1-201ENST00000560672 389 ntBASIC16.54■□□□□ 0.24
CSNK1G3Q9Y6M4 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
CSNK1G3Q9Y6M4 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC16.54■□□□□ 0.24
CSNK1G3Q9Y6M4 AL009183.1-201ENST00000603760 355 ntBASIC16.54■□□□□ 0.24
CSNK1G3Q9Y6M4 AC093512.1-201ENST00000617969 520 ntBASIC16.54■□□□□ 0.24
CSNK1G3Q9Y6M4 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC16.54■□□□□ 0.24
CSNK1G3Q9Y6M4 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC16.54■□□□□ 0.24
CSNK1G3Q9Y6M4 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC16.54■□□□□ 0.24
CSNK1G3Q9Y6M4 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CSNK1G3Q9Y6M4 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CSNK1G3Q9Y6M4 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
CSNK1G3Q9Y6M4 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
CSNK1G3Q9Y6M4 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
CSNK1G3Q9Y6M4 AL355312.1-201ENST00000407115 2176 ntBASIC16.54■□□□□ 0.24
CSNK1G3Q9Y6M4 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CSNK1G3Q9Y6M4 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CSNK1G3Q9Y6M4 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
CSNK1G3Q9Y6M4 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CSNK1G3Q9Y6M4 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CSNK1G3Q9Y6M4 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC16.53■□□□□ 0.24
CSNK1G3Q9Y6M4 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC16.53■□□□□ 0.24
CSNK1G3Q9Y6M4 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CSNK1G3Q9Y6M4 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CSNK1G3Q9Y6M4 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms