Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC16.37■□□□□ 0.21
PCDHGA6Q9Y5G7 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
PCDHGA6Q9Y5G7 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHGA6Q9Y5G7 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC16.37■□□□□ 0.21
PCDHGA6Q9Y5G7 PCDHB19P-201ENST00000570871 2371 ntBASIC16.37■□□□□ 0.21
PCDHGA6Q9Y5G7 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHGA6Q9Y5G7 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHGA6Q9Y5G7 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHGA6Q9Y5G7 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
PCDHGA6Q9Y5G7 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
PCDHGA6Q9Y5G7 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHGA6Q9Y5G7 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC16.37■□□□□ 0.21
PCDHGA6Q9Y5G7 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHGA6Q9Y5G7 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.37■□□□□ 0.21
PCDHGA6Q9Y5G7 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.36■□□□□ 0.21
PCDHGA6Q9Y5G7 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
PCDHGA6Q9Y5G7 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGA6Q9Y5G7 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC16.36■□□□□ 0.21
PCDHGA6Q9Y5G7 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
PCDHGA6Q9Y5G7 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.36■□□□□ 0.21
PCDHGA6Q9Y5G7 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGA6Q9Y5G7 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGA6Q9Y5G7 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
PCDHGA6Q9Y5G7 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGA6Q9Y5G7 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC16.36■□□□□ 0.21
PCDHGA6Q9Y5G7 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGA6Q9Y5G7 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
PCDHGA6Q9Y5G7 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC16.36■□□□□ 0.21
PCDHGA6Q9Y5G7 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
PCDHGA6Q9Y5G7 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGA6Q9Y5G7 MYCLP1-201ENST00000372451 1075 ntBASIC16.36■□□□□ 0.21
PCDHGA6Q9Y5G7 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGA6Q9Y5G7 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGA6Q9Y5G7 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGA6Q9Y5G7 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC16.36■□□□□ 0.21
PCDHGA6Q9Y5G7 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC16.36■□□□□ 0.21
PCDHGA6Q9Y5G7 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC16.36■□□□□ 0.21
PCDHGA6Q9Y5G7 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC16.36■□□□□ 0.21
PCDHGA6Q9Y5G7 AC010654.1-201ENST00000615722 808 ntBASIC16.36■□□□□ 0.21
PCDHGA6Q9Y5G7 AC004790.2-201ENST00000623588 572 ntBASIC16.36■□□□□ 0.21
PCDHGA6Q9Y5G7 C20orf181-201ENST00000623918 480 ntBASIC16.36■□□□□ 0.21
PCDHGA6Q9Y5G7 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGA6Q9Y5G7 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGA6Q9Y5G7 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
PCDHGA6Q9Y5G7 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGA6Q9Y5G7 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGA6Q9Y5G7 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC16.36■□□□□ 0.21
PCDHGA6Q9Y5G7 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
PCDHGA6Q9Y5G7 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.36■□□□□ 0.21
PCDHGA6Q9Y5G7 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
PCDHGA6Q9Y5G7 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGA6Q9Y5G7 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGA6Q9Y5G7 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGA6Q9Y5G7 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC16.36■□□□□ 0.21
PCDHGA6Q9Y5G7 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.36■□□□□ 0.21
PCDHGA6Q9Y5G7 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC16.36■□□□□ 0.21
PCDHGA6Q9Y5G7 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
PCDHGA6Q9Y5G7 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGA6Q9Y5G7 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
PCDHGA6Q9Y5G7 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC16.35■□□□□ 0.21
PCDHGA6Q9Y5G7 AC105020.1-201ENST00000435356 2205 ntBASIC16.35■□□□□ 0.21
PCDHGA6Q9Y5G7 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.35■□□□□ 0.21
PCDHGA6Q9Y5G7 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC16.35■□□□□ 0.21
PCDHGA6Q9Y5G7 AC009336.1-201ENST00000608941 1553 ntBASIC16.35■□□□□ 0.21
PCDHGA6Q9Y5G7 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC16.35■□□□□ 0.21
PCDHGA6Q9Y5G7 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC16.35■□□□□ 0.21
PCDHGA6Q9Y5G7 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHGA6Q9Y5G7 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC16.35■□□□□ 0.21
PCDHGA6Q9Y5G7 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
PCDHGA6Q9Y5G7 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHGA6Q9Y5G7 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHGA6Q9Y5G7 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHGA6Q9Y5G7 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHGA6Q9Y5G7 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHGA6Q9Y5G7 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHGA6Q9Y5G7 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC16.35■□□□□ 0.21
PCDHGA6Q9Y5G7 AP002414.1-201ENST00000391405 1147 ntBASIC16.35■□□□□ 0.21
PCDHGA6Q9Y5G7 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC16.35■□□□□ 0.21
PCDHGA6Q9Y5G7 MKNK2P1-201ENST00000437526 628 ntBASIC16.35■□□□□ 0.21
PCDHGA6Q9Y5G7 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC16.35■□□□□ 0.21
PCDHGA6Q9Y5G7 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC16.35■□□□□ 0.21
PCDHGA6Q9Y5G7 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC16.35■□□□□ 0.21
PCDHGA6Q9Y5G7 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC16.35■□□□□ 0.21
PCDHGA6Q9Y5G7 RIN3-211ENST00000557762 517 ntTSL 3 BASIC16.35■□□□□ 0.21
PCDHGA6Q9Y5G7 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC16.35■□□□□ 0.21
PCDHGA6Q9Y5G7 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC16.35■□□□□ 0.21
PCDHGA6Q9Y5G7 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
PCDHGA6Q9Y5G7 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC16.35■□□□□ 0.21
PCDHGA6Q9Y5G7 GGTLC5P-201ENST00000617623 998 ntBASIC16.35■□□□□ 0.21
PCDHGA6Q9Y5G7 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC16.35■□□□□ 0.21
PCDHGA6Q9Y5G7 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHGA6Q9Y5G7 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC16.35■□□□□ 0.21
PCDHGA6Q9Y5G7 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHGA6Q9Y5G7 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHGA6Q9Y5G7 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHGA6Q9Y5G7 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGA6Q9Y5G7 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGA6Q9Y5G7 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
PCDHGA6Q9Y5G7 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.34■□□□□ 0.21
PCDHGA6Q9Y5G7 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms