Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHGA9Q9Y5G4 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC15.86■□□□□ 0.13
PCDHGA9Q9Y5G4 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHGA9Q9Y5G4 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHGA9Q9Y5G4 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHGA9Q9Y5G4 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
PCDHGA9Q9Y5G4 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHGA9Q9Y5G4 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
PCDHGA9Q9Y5G4 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHGA9Q9Y5G4 CALY-203ENST00000368558 825 ntTSL 5 BASIC15.86■□□□□ 0.13
PCDHGA9Q9Y5G4 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHGA9Q9Y5G4 CBR1-202ENST00000399191 838 ntTSL 3 BASIC15.86■□□□□ 0.13
PCDHGA9Q9Y5G4 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC15.86■□□□□ 0.13
PCDHGA9Q9Y5G4 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC15.86■□□□□ 0.13
PCDHGA9Q9Y5G4 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC15.86■□□□□ 0.13
PCDHGA9Q9Y5G4 WDR53-203ENST00000429115 683 ntTSL 2 BASIC15.86■□□□□ 0.13
PCDHGA9Q9Y5G4 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC15.86■□□□□ 0.13
PCDHGA9Q9Y5G4 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
PCDHGA9Q9Y5G4 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC15.86■□□□□ 0.13
PCDHGA9Q9Y5G4 RPL28-205ENST00000558131 444 ntTSL 5 BASIC15.86■□□□□ 0.13
PCDHGA9Q9Y5G4 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHGA9Q9Y5G4 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHGA9Q9Y5G4 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHGA9Q9Y5G4 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC15.86■□□□□ 0.13
PCDHGA9Q9Y5G4 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHGA9Q9Y5G4 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
PCDHGA9Q9Y5G4 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHGA9Q9Y5G4 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHGA9Q9Y5G4 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHGA9Q9Y5G4 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHGA9Q9Y5G4 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHGA9Q9Y5G4 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PCDHGA9Q9Y5G4 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
PCDHGA9Q9Y5G4 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC15.85■□□□□ 0.13
PCDHGA9Q9Y5G4 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
PCDHGA9Q9Y5G4 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC15.85■□□□□ 0.13
PCDHGA9Q9Y5G4 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
PCDHGA9Q9Y5G4 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC15.85■□□□□ 0.13
PCDHGA9Q9Y5G4 AC002056.1-201ENST00000395613 760 ntBASIC15.85■□□□□ 0.13
PCDHGA9Q9Y5G4 BCRP1-201ENST00000444246 691 ntBASIC15.85■□□□□ 0.13
PCDHGA9Q9Y5G4 AL513480.1-201ENST00000451731 511 ntBASIC15.85■□□□□ 0.13
PCDHGA9Q9Y5G4 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC15.85■□□□□ 0.13
PCDHGA9Q9Y5G4 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC15.85■□□□□ 0.13
PCDHGA9Q9Y5G4 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PCDHGA9Q9Y5G4 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PCDHGA9Q9Y5G4 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC15.85■□□□□ 0.13
PCDHGA9Q9Y5G4 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC15.85■□□□□ 0.13
PCDHGA9Q9Y5G4 CYB561-216ENST00000582297 897 ntTSL 3 BASIC15.85■□□□□ 0.13
PCDHGA9Q9Y5G4 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
PCDHGA9Q9Y5G4 AC093512.1-201ENST00000617969 520 ntBASIC15.85■□□□□ 0.13
PCDHGA9Q9Y5G4 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC15.85■□□□□ 0.13
PCDHGA9Q9Y5G4 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
PCDHGA9Q9Y5G4 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PCDHGA9Q9Y5G4 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PCDHGA9Q9Y5G4 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC15.85■□□□□ 0.13
PCDHGA9Q9Y5G4 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
PCDHGA9Q9Y5G4 AC129492.6-201ENST00000611383 1305 ntBASIC15.85■□□□□ 0.13
PCDHGA9Q9Y5G4 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
PCDHGA9Q9Y5G4 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
PCDHGA9Q9Y5G4 AC011676.5-201ENST00000624864 2660 ntBASIC15.85■□□□□ 0.13
PCDHGA9Q9Y5G4 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC15.85■□□□□ 0.13
PCDHGA9Q9Y5G4 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
PCDHGA9Q9Y5G4 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PCDHGA9Q9Y5G4 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PCDHGA9Q9Y5G4 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PCDHGA9Q9Y5G4 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PCDHGA9Q9Y5G4 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PCDHGA9Q9Y5G4 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PCDHGA9Q9Y5G4 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
PCDHGA9Q9Y5G4 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PCDHGA9Q9Y5G4 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PCDHGA9Q9Y5G4 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC15.85■□□□□ 0.13
PCDHGA9Q9Y5G4 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
PCDHGA9Q9Y5G4 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PCDHGA9Q9Y5G4 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC15.84■□□□□ 0.13
PCDHGA9Q9Y5G4 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC15.84■□□□□ 0.13
PCDHGA9Q9Y5G4 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PCDHGA9Q9Y5G4 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
PCDHGA9Q9Y5G4 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PCDHGA9Q9Y5G4 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
PCDHGA9Q9Y5G4 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PCDHGA9Q9Y5G4 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PCDHGA9Q9Y5G4 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PCDHGA9Q9Y5G4 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC15.84■□□□□ 0.13
PCDHGA9Q9Y5G4 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
PCDHGA9Q9Y5G4 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PCDHGA9Q9Y5G4 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
PCDHGA9Q9Y5G4 AL035633.1-201ENST00000406139 838 ntBASIC15.84■□□□□ 0.13
PCDHGA9Q9Y5G4 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC15.84■□□□□ 0.13
PCDHGA9Q9Y5G4 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC15.84■□□□□ 0.13
PCDHGA9Q9Y5G4 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC15.84■□□□□ 0.13
PCDHGA9Q9Y5G4 PAWRP1-201ENST00000451083 565 ntBASIC15.84■□□□□ 0.13
PCDHGA9Q9Y5G4 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC15.84■□□□□ 0.13
PCDHGA9Q9Y5G4 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC15.84■□□□□ 0.13
PCDHGA9Q9Y5G4 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC15.84■□□□□ 0.13
PCDHGA9Q9Y5G4 NMU-203ENST00000507338 658 ntTSL 3 BASIC15.84■□□□□ 0.13
PCDHGA9Q9Y5G4 GATB-205ENST00000508611 605 ntTSL 2 BASIC15.84■□□□□ 0.13
PCDHGA9Q9Y5G4 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC15.84■□□□□ 0.13
PCDHGA9Q9Y5G4 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC15.84■□□□□ 0.13
PCDHGA9Q9Y5G4 AC015911.4-201ENST00000588022 1070 ntBASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms