Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 PON3-205ENST00000451904 1053 ntTSL 3 BASIC14.24□□□□□ -0.13
KCNIP3Q9Y2W7 ECEL1P2-202ENST00000465689 757 ntBASIC14.24□□□□□ -0.13
KCNIP3Q9Y2W7 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC14.24□□□□□ -0.13
KCNIP3Q9Y2W7 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC14.24□□□□□ -0.13
KCNIP3Q9Y2W7 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
KCNIP3Q9Y2W7 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC14.24□□□□□ -0.13
KCNIP3Q9Y2W7 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC14.24□□□□□ -0.13
KCNIP3Q9Y2W7 MIR4651-201ENST00000582622 73 ntBASIC14.24□□□□□ -0.13
KCNIP3Q9Y2W7 MIR4785-201ENST00000585005 73 ntBASIC14.24□□□□□ -0.13
KCNIP3Q9Y2W7 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
KCNIP3Q9Y2W7 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
KCNIP3Q9Y2W7 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
KCNIP3Q9Y2W7 AC097376.2-205ENST00000610159 5334 ntBASIC14.24□□□□□ -0.13
KCNIP3Q9Y2W7 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
KCNIP3Q9Y2W7 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
KCNIP3Q9Y2W7 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC14.24□□□□□ -0.13
KCNIP3Q9Y2W7 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
KCNIP3Q9Y2W7 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
KCNIP3Q9Y2W7 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
KCNIP3Q9Y2W7 OR2I1P-209ENST00000641730 5365 ntBASIC14.24□□□□□ -0.13
KCNIP3Q9Y2W7 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
KCNIP3Q9Y2W7 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
KCNIP3Q9Y2W7 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
KCNIP3Q9Y2W7 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
KCNIP3Q9Y2W7 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
KCNIP3Q9Y2W7 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
KCNIP3Q9Y2W7 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
KCNIP3Q9Y2W7 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
KCNIP3Q9Y2W7 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
KCNIP3Q9Y2W7 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
KCNIP3Q9Y2W7 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC14.24□□□□□ -0.13
KCNIP3Q9Y2W7 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
KCNIP3Q9Y2W7 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
KCNIP3Q9Y2W7 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
KCNIP3Q9Y2W7 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
KCNIP3Q9Y2W7 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC14.23□□□□□ -0.13
KCNIP3Q9Y2W7 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
KCNIP3Q9Y2W7 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
KCNIP3Q9Y2W7 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
KCNIP3Q9Y2W7 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
KCNIP3Q9Y2W7 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC14.23□□□□□ -0.13
KCNIP3Q9Y2W7 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC14.23□□□□□ -0.13
KCNIP3Q9Y2W7 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
KCNIP3Q9Y2W7 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC14.23□□□□□ -0.13
KCNIP3Q9Y2W7 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
KCNIP3Q9Y2W7 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
KCNIP3Q9Y2W7 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC14.23□□□□□ -0.13
KCNIP3Q9Y2W7 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
KCNIP3Q9Y2W7 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
KCNIP3Q9Y2W7 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC14.23□□□□□ -0.13
KCNIP3Q9Y2W7 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
KCNIP3Q9Y2W7 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC14.23□□□□□ -0.13
KCNIP3Q9Y2W7 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC14.23□□□□□ -0.13
KCNIP3Q9Y2W7 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
KCNIP3Q9Y2W7 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC14.23□□□□□ -0.13
KCNIP3Q9Y2W7 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC14.23□□□□□ -0.13
KCNIP3Q9Y2W7 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC14.23□□□□□ -0.13
KCNIP3Q9Y2W7 AC109462.3-201ENST00000573934 613 ntBASIC14.23□□□□□ -0.13
KCNIP3Q9Y2W7 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
KCNIP3Q9Y2W7 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
KCNIP3Q9Y2W7 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
KCNIP3Q9Y2W7 GLDC-219ENST00000640208 420 ntTSL 2 BASIC14.23□□□□□ -0.13
KCNIP3Q9Y2W7 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC14.23□□□□□ -0.13
KCNIP3Q9Y2W7 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC14.23□□□□□ -0.13
KCNIP3Q9Y2W7 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
KCNIP3Q9Y2W7 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC14.23□□□□□ -0.13
KCNIP3Q9Y2W7 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
KCNIP3Q9Y2W7 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC14.23□□□□□ -0.13
KCNIP3Q9Y2W7 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC14.23□□□□□ -0.13
KCNIP3Q9Y2W7 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
KCNIP3Q9Y2W7 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC14.23□□□□□ -0.13
KCNIP3Q9Y2W7 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC14.23□□□□□ -0.13
KCNIP3Q9Y2W7 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC14.23□□□□□ -0.13
KCNIP3Q9Y2W7 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
KCNIP3Q9Y2W7 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
KCNIP3Q9Y2W7 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
KCNIP3Q9Y2W7 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC14.23□□□□□ -0.13
KCNIP3Q9Y2W7 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
KCNIP3Q9Y2W7 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
KCNIP3Q9Y2W7 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
KCNIP3Q9Y2W7 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
KCNIP3Q9Y2W7 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC14.22□□□□□ -0.13
KCNIP3Q9Y2W7 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
KCNIP3Q9Y2W7 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
KCNIP3Q9Y2W7 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
KCNIP3Q9Y2W7 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
KCNIP3Q9Y2W7 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
KCNIP3Q9Y2W7 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
KCNIP3Q9Y2W7 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
KCNIP3Q9Y2W7 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC14.22□□□□□ -0.13
KCNIP3Q9Y2W7 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
KCNIP3Q9Y2W7 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
KCNIP3Q9Y2W7 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC14.22□□□□□ -0.13
KCNIP3Q9Y2W7 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC14.22□□□□□ -0.13
KCNIP3Q9Y2W7 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
KCNIP3Q9Y2W7 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC14.22□□□□□ -0.13
KCNIP3Q9Y2W7 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
KCNIP3Q9Y2W7 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
KCNIP3Q9Y2W7 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC14.22□□□□□ -0.13
KCNIP3Q9Y2W7 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms