Protein–RNA interactions for Protein: Q9UKZ1

CNOT11, CCR4-NOT transcription complex subunit 11, humanhuman

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT11Q9UKZ1 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CNOT11Q9UKZ1 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CNOT11Q9UKZ1 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CNOT11Q9UKZ1 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC16.32■□□□□ 0.2
CNOT11Q9UKZ1 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC16.32■□□□□ 0.2
CNOT11Q9UKZ1 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC16.32■□□□□ 0.2
CNOT11Q9UKZ1 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CNOT11Q9UKZ1 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CNOT11Q9UKZ1 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC16.32■□□□□ 0.2
CNOT11Q9UKZ1 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC16.32■□□□□ 0.2
CNOT11Q9UKZ1 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CNOT11Q9UKZ1 RN7SL510P-201ENST00000581311 263 ntBASIC16.32■□□□□ 0.2
CNOT11Q9UKZ1 AL591684.3-201ENST00000605187 298 ntBASIC16.32■□□□□ 0.2
CNOT11Q9UKZ1 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.32■□□□□ 0.2
CNOT11Q9UKZ1 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC16.32■□□□□ 0.2
CNOT11Q9UKZ1 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC16.32■□□□□ 0.2
CNOT11Q9UKZ1 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC16.32■□□□□ 0.2
CNOT11Q9UKZ1 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC16.32■□□□□ 0.2
CNOT11Q9UKZ1 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CNOT11Q9UKZ1 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CNOT11Q9UKZ1 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CNOT11Q9UKZ1 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
CNOT11Q9UKZ1 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CNOT11Q9UKZ1 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.32■□□□□ 0.2
CNOT11Q9UKZ1 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16.32■□□□□ 0.2
CNOT11Q9UKZ1 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CNOT11Q9UKZ1 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CNOT11Q9UKZ1 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC16.31■□□□□ 0.2
CNOT11Q9UKZ1 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC16.31■□□□□ 0.2
CNOT11Q9UKZ1 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CNOT11Q9UKZ1 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CNOT11Q9UKZ1 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CNOT11Q9UKZ1 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CNOT11Q9UKZ1 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CNOT11Q9UKZ1 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CNOT11Q9UKZ1 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC16.31■□□□□ 0.2
CNOT11Q9UKZ1 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC16.31■□□□□ 0.2
CNOT11Q9UKZ1 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC16.31■□□□□ 0.2
CNOT11Q9UKZ1 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CNOT11Q9UKZ1 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC16.31■□□□□ 0.2
CNOT11Q9UKZ1 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC16.31■□□□□ 0.2
CNOT11Q9UKZ1 AC092384.3-202ENST00000564646 2873 ntBASIC16.31■□□□□ 0.2
CNOT11Q9UKZ1 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC16.31■□□□□ 0.2
CNOT11Q9UKZ1 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC16.31■□□□□ 0.2
CNOT11Q9UKZ1 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CNOT11Q9UKZ1 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CNOT11Q9UKZ1 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CNOT11Q9UKZ1 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC16.31■□□□□ 0.2
CNOT11Q9UKZ1 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC16.31■□□□□ 0.2
CNOT11Q9UKZ1 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC16.31■□□□□ 0.2
CNOT11Q9UKZ1 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC16.31■□□□□ 0.2
CNOT11Q9UKZ1 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC16.31■□□□□ 0.2
CNOT11Q9UKZ1 LINC01711-201ENST00000598340 967 ntBASIC16.31■□□□□ 0.2
CNOT11Q9UKZ1 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC16.31■□□□□ 0.2
CNOT11Q9UKZ1 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CNOT11Q9UKZ1 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC16.31■□□□□ 0.2
CNOT11Q9UKZ1 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC16.31■□□□□ 0.2
CNOT11Q9UKZ1 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC16.31■□□□□ 0.2
CNOT11Q9UKZ1 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
CNOT11Q9UKZ1 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16.31■□□□□ 0.2
CNOT11Q9UKZ1 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CNOT11Q9UKZ1 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CNOT11Q9UKZ1 INTS4P1-201ENST00000438455 1935 ntBASIC16.31■□□□□ 0.2
CNOT11Q9UKZ1 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CNOT11Q9UKZ1 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
CNOT11Q9UKZ1 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CNOT11Q9UKZ1 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC16.31■□□□□ 0.2
CNOT11Q9UKZ1 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.3■□□□□ 0.2
CNOT11Q9UKZ1 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC16.3■□□□□ 0.2
CNOT11Q9UKZ1 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC16.3■□□□□ 0.2
CNOT11Q9UKZ1 AC099063.4-201ENST00000641099 1602 ntBASIC16.3■□□□□ 0.2
CNOT11Q9UKZ1 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CNOT11Q9UKZ1 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC16.3■□□□□ 0.2
CNOT11Q9UKZ1 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC16.3■□□□□ 0.2
CNOT11Q9UKZ1 TBC1D3P5-201ENST00000579401 1545 ntBASIC16.3■□□□□ 0.2
CNOT11Q9UKZ1 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CNOT11Q9UKZ1 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CNOT11Q9UKZ1 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC16.3■□□□□ 0.2
CNOT11Q9UKZ1 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CNOT11Q9UKZ1 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CNOT11Q9UKZ1 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
CNOT11Q9UKZ1 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16.3■□□□□ 0.2
CNOT11Q9UKZ1 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC16.3■□□□□ 0.2
CNOT11Q9UKZ1 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CNOT11Q9UKZ1 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC16.3■□□□□ 0.2
CNOT11Q9UKZ1 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
CNOT11Q9UKZ1 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
CNOT11Q9UKZ1 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC16.3■□□□□ 0.2
CNOT11Q9UKZ1 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CNOT11Q9UKZ1 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CNOT11Q9UKZ1 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CNOT11Q9UKZ1 DFFB-203ENST00000341385 572 ntTSL 5 BASIC16.3■□□□□ 0.2
CNOT11Q9UKZ1 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC16.3■□□□□ 0.2
CNOT11Q9UKZ1 LSM5-204ENST00000409909 740 ntTSL 2 BASIC16.3■□□□□ 0.2
CNOT11Q9UKZ1 AC007967.3-201ENST00000434308 558 ntBASIC16.3■□□□□ 0.2
CNOT11Q9UKZ1 TPM4P1-201ENST00000436100 807 ntBASIC16.3■□□□□ 0.2
CNOT11Q9UKZ1 THAP5-204ENST00000438865 868 ntTSL 2 BASIC16.3■□□□□ 0.2
CNOT11Q9UKZ1 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC16.3■□□□□ 0.2
CNOT11Q9UKZ1 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC16.3■□□□□ 0.2
CNOT11Q9UKZ1 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms