Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC16.46■□□□□ 0.23
NDE1Q9NXR1 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NDE1Q9NXR1 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NDE1Q9NXR1 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NDE1Q9NXR1 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NDE1Q9NXR1 PON3-205ENST00000451904 1053 ntTSL 3 BASIC16.46■□□□□ 0.23
NDE1Q9NXR1 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NDE1Q9NXR1 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC16.46■□□□□ 0.23
NDE1Q9NXR1 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC16.46■□□□□ 0.23
NDE1Q9NXR1 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NDE1Q9NXR1 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NDE1Q9NXR1 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC16.46■□□□□ 0.23
NDE1Q9NXR1 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC16.46■□□□□ 0.23
NDE1Q9NXR1 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC16.46■□□□□ 0.23
NDE1Q9NXR1 AC126755.1-201ENST00000525846 6405 ntBASIC16.46■□□□□ 0.23
NDE1Q9NXR1 GPR89P-201ENST00000407924 1495 ntBASIC16.46■□□□□ 0.23
NDE1Q9NXR1 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NDE1Q9NXR1 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
NDE1Q9NXR1 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
NDE1Q9NXR1 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.22
NDE1Q9NXR1 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
NDE1Q9NXR1 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
NDE1Q9NXR1 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
NDE1Q9NXR1 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC16.46■□□□□ 0.22
NDE1Q9NXR1 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.22
NDE1Q9NXR1 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC16.46■□□□□ 0.22
NDE1Q9NXR1 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
NDE1Q9NXR1 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
NDE1Q9NXR1 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC16.46■□□□□ 0.22
NDE1Q9NXR1 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
NDE1Q9NXR1 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NDE1Q9NXR1 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.45■□□□□ 0.22
NDE1Q9NXR1 FRMD8P1-201ENST00000440433 1524 ntBASIC16.45■□□□□ 0.22
NDE1Q9NXR1 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
NDE1Q9NXR1 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
NDE1Q9NXR1 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.45■□□□□ 0.22
NDE1Q9NXR1 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NDE1Q9NXR1 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC16.45■□□□□ 0.22
NDE1Q9NXR1 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
NDE1Q9NXR1 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC16.45■□□□□ 0.22
NDE1Q9NXR1 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC16.45■□□□□ 0.22
NDE1Q9NXR1 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
NDE1Q9NXR1 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16.45■□□□□ 0.22
NDE1Q9NXR1 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
NDE1Q9NXR1 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NDE1Q9NXR1 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NDE1Q9NXR1 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NDE1Q9NXR1 Telomerase-vert.1-201ENST00000363312 438 ntBASIC16.45■□□□□ 0.22
NDE1Q9NXR1 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NDE1Q9NXR1 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NDE1Q9NXR1 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC16.45■□□□□ 0.22
NDE1Q9NXR1 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC16.45■□□□□ 0.22
NDE1Q9NXR1 AC090192.1-201ENST00000517740 490 ntBASIC16.45■□□□□ 0.22
NDE1Q9NXR1 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC16.45■□□□□ 0.22
NDE1Q9NXR1 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NDE1Q9NXR1 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC16.45■□□□□ 0.22
NDE1Q9NXR1 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC16.45■□□□□ 0.22
NDE1Q9NXR1 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
NDE1Q9NXR1 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC16.45■□□□□ 0.22
NDE1Q9NXR1 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC16.45■□□□□ 0.22
NDE1Q9NXR1 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC16.45■□□□□ 0.22
NDE1Q9NXR1 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NDE1Q9NXR1 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
NDE1Q9NXR1 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
NDE1Q9NXR1 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
NDE1Q9NXR1 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NDE1Q9NXR1 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
NDE1Q9NXR1 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
NDE1Q9NXR1 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
NDE1Q9NXR1 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NDE1Q9NXR1 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
NDE1Q9NXR1 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NDE1Q9NXR1 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
NDE1Q9NXR1 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC16.44■□□□□ 0.22
NDE1Q9NXR1 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
NDE1Q9NXR1 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
NDE1Q9NXR1 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NDE1Q9NXR1 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
NDE1Q9NXR1 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NDE1Q9NXR1 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC16.44■□□□□ 0.22
NDE1Q9NXR1 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
NDE1Q9NXR1 SAPCD2P2-201ENST00000431719 1174 ntBASIC16.44■□□□□ 0.22
NDE1Q9NXR1 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC16.44■□□□□ 0.22
NDE1Q9NXR1 ECEL1P2-202ENST00000465689 757 ntBASIC16.44■□□□□ 0.22
NDE1Q9NXR1 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC16.44■□□□□ 0.22
NDE1Q9NXR1 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC16.44■□□□□ 0.22
NDE1Q9NXR1 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC16.44■□□□□ 0.22
NDE1Q9NXR1 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC16.44■□□□□ 0.22
NDE1Q9NXR1 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC16.44■□□□□ 0.22
NDE1Q9NXR1 GPX4-207ENST00000589115 812 ntTSL 2 BASIC16.44■□□□□ 0.22
NDE1Q9NXR1 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC16.44■□□□□ 0.22
NDE1Q9NXR1 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC16.44■□□□□ 0.22
NDE1Q9NXR1 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
NDE1Q9NXR1 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC16.44■□□□□ 0.22
NDE1Q9NXR1 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
NDE1Q9NXR1 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
NDE1Q9NXR1 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NDE1Q9NXR1 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NDE1Q9NXR1 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
NDE1Q9NXR1 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms