Protein–RNA interactions for Protein: Q9NQ40

SLC52A3, Solute carrier family 52, riboflavin transporter, member 3, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A3Q9NQ40 MIR4492-201ENST00000581627 80 ntBASIC16.03■□□□□ 0.16
SLC52A3Q9NQ40 Z69720.1-201ENST00000601483 472 ntBASIC16.03■□□□□ 0.16
SLC52A3Q9NQ40 AC116407.4-201ENST00000623319 1061 ntBASIC16.03■□□□□ 0.16
SLC52A3Q9NQ40 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
SLC52A3Q9NQ40 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
SLC52A3Q9NQ40 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.03■□□□□ 0.16
SLC52A3Q9NQ40 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SLC52A3Q9NQ40 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SLC52A3Q9NQ40 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.03■□□□□ 0.16
SLC52A3Q9NQ40 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC16.03■□□□□ 0.16
SLC52A3Q9NQ40 BCL2-203ENST00000589955 5011 ntBASIC16.03■□□□□ 0.16
SLC52A3Q9NQ40 VILL-207ENST00000465644 1857 ntTSL 5 BASIC16.03■□□□□ 0.16
SLC52A3Q9NQ40 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
SLC52A3Q9NQ40 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
SLC52A3Q9NQ40 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SLC52A3Q9NQ40 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
SLC52A3Q9NQ40 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SLC52A3Q9NQ40 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
SLC52A3Q9NQ40 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
SLC52A3Q9NQ40 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SLC52A3Q9NQ40 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
SLC52A3Q9NQ40 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
SLC52A3Q9NQ40 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
SLC52A3Q9NQ40 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SLC52A3Q9NQ40 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
SLC52A3Q9NQ40 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SLC52A3Q9NQ40 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SLC52A3Q9NQ40 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
SLC52A3Q9NQ40 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SLC52A3Q9NQ40 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
SLC52A3Q9NQ40 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
SLC52A3Q9NQ40 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SLC52A3Q9NQ40 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SLC52A3Q9NQ40 ARMC10P1-201ENST00000313754 855 ntBASIC16.02■□□□□ 0.16
SLC52A3Q9NQ40 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
SLC52A3Q9NQ40 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
SLC52A3Q9NQ40 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
SLC52A3Q9NQ40 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC16.02■□□□□ 0.16
SLC52A3Q9NQ40 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC16.02■□□□□ 0.16
SLC52A3Q9NQ40 ABCD1P5-201ENST00000445663 754 ntBASIC16.02■□□□□ 0.16
SLC52A3Q9NQ40 RBSN-204ENST00000449050 903 ntTSL 2 BASIC16.02■□□□□ 0.16
SLC52A3Q9NQ40 MINOS1P3-201ENST00000457048 203 ntBASIC16.02■□□□□ 0.16
SLC52A3Q9NQ40 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
SLC52A3Q9NQ40 TOB2P1-201ENST00000469761 992 ntBASIC16.02■□□□□ 0.16
SLC52A3Q9NQ40 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SLC52A3Q9NQ40 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC16.02■□□□□ 0.16
SLC52A3Q9NQ40 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC16.02■□□□□ 0.16
SLC52A3Q9NQ40 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
SLC52A3Q9NQ40 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC16.02■□□□□ 0.16
SLC52A3Q9NQ40 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC16.02■□□□□ 0.16
SLC52A3Q9NQ40 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
SLC52A3Q9NQ40 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SLC52A3Q9NQ40 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SLC52A3Q9NQ40 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC16.02■□□□□ 0.16
SLC52A3Q9NQ40 BANP-201ENST00000286122 2368 ntTSL 5 BASIC16.02■□□□□ 0.15
SLC52A3Q9NQ40 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
SLC52A3Q9NQ40 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC16.02■□□□□ 0.15
SLC52A3Q9NQ40 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.02■□□□□ 0.15
SLC52A3Q9NQ40 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SLC52A3Q9NQ40 HLA-DQB2-231ENST00000435145 2026 ntBASIC16.02■□□□□ 0.15
SLC52A3Q9NQ40 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
SLC52A3Q9NQ40 AC010491.1-201ENST00000563101 2797 ntBASIC16.02■□□□□ 0.15
SLC52A3Q9NQ40 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC16.02■□□□□ 0.15
SLC52A3Q9NQ40 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SLC52A3Q9NQ40 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SLC52A3Q9NQ40 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
SLC52A3Q9NQ40 AC092384.3-202ENST00000564646 2873 ntBASIC16.01■□□□□ 0.15
SLC52A3Q9NQ40 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SLC52A3Q9NQ40 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SLC52A3Q9NQ40 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
SLC52A3Q9NQ40 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
SLC52A3Q9NQ40 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC16.01■□□□□ 0.15
SLC52A3Q9NQ40 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
SLC52A3Q9NQ40 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SLC52A3Q9NQ40 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SLC52A3Q9NQ40 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
SLC52A3Q9NQ40 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
SLC52A3Q9NQ40 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
SLC52A3Q9NQ40 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC16.01■□□□□ 0.15
SLC52A3Q9NQ40 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC16.01■□□□□ 0.15
SLC52A3Q9NQ40 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SLC52A3Q9NQ40 PRYP5-201ENST00000451909 266 ntBASIC16.01■□□□□ 0.15
SLC52A3Q9NQ40 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC16.01■□□□□ 0.15
SLC52A3Q9NQ40 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC16.01■□□□□ 0.15
SLC52A3Q9NQ40 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC16.01■□□□□ 0.15
SLC52A3Q9NQ40 MIR3180-1-201ENST00000580374 94 ntBASIC16.01■□□□□ 0.15
SLC52A3Q9NQ40 NT5C-211ENST00000582170 653 ntTSL 3 BASIC16.01■□□□□ 0.15
SLC52A3Q9NQ40 MIR3180-3-201ENST00000584616 94 ntBASIC16.01■□□□□ 0.15
SLC52A3Q9NQ40 GZMM-202ENST00000592501 941 ntTSL 3 BASIC16.01■□□□□ 0.15
SLC52A3Q9NQ40 AL445228.2-201ENST00000605589 952 ntBASIC16.01■□□□□ 0.15
SLC52A3Q9NQ40 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC16.01■□□□□ 0.15
SLC52A3Q9NQ40 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SLC52A3Q9NQ40 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
SLC52A3Q9NQ40 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
SLC52A3Q9NQ40 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SLC52A3Q9NQ40 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SLC52A3Q9NQ40 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SLC52A3Q9NQ40 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SLC52A3Q9NQ40 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC16.01■□□□□ 0.15
SLC52A3Q9NQ40 AL031731.1-201ENST00000642131 2094 ntBASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms