Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC16.11■□□□□ 0.17
CNTNAP3Q9BZ76 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CNTNAP3Q9BZ76 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
CNTNAP3Q9BZ76 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
CNTNAP3Q9BZ76 FZD10-202ENST00000539839 3282 ntBASIC16.11■□□□□ 0.17
CNTNAP3Q9BZ76 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CNTNAP3Q9BZ76 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
CNTNAP3Q9BZ76 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CNTNAP3Q9BZ76 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC16.1■□□□□ 0.17
CNTNAP3Q9BZ76 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CNTNAP3Q9BZ76 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CNTNAP3Q9BZ76 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
CNTNAP3Q9BZ76 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CNTNAP3Q9BZ76 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CNTNAP3Q9BZ76 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC16.1■□□□□ 0.17
CNTNAP3Q9BZ76 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
CNTNAP3Q9BZ76 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CNTNAP3Q9BZ76 RNASE10-201ENST00000328444 717 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
CNTNAP3Q9BZ76 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CNTNAP3Q9BZ76 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CNTNAP3Q9BZ76 BTBD6P1-201ENST00000412176 1267 ntBASIC16.1■□□□□ 0.17
CNTNAP3Q9BZ76 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC16.1■□□□□ 0.17
CNTNAP3Q9BZ76 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC16.1■□□□□ 0.17
CNTNAP3Q9BZ76 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC16.1■□□□□ 0.17
CNTNAP3Q9BZ76 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
CNTNAP3Q9BZ76 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CNTNAP3Q9BZ76 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC16.1■□□□□ 0.17
CNTNAP3Q9BZ76 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
CNTNAP3Q9BZ76 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CNTNAP3Q9BZ76 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC16.1■□□□□ 0.17
CNTNAP3Q9BZ76 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CNTNAP3Q9BZ76 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CNTNAP3Q9BZ76 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CNTNAP3Q9BZ76 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CNTNAP3Q9BZ76 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CNTNAP3Q9BZ76 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
CNTNAP3Q9BZ76 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CNTNAP3Q9BZ76 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CNTNAP3Q9BZ76 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
CNTNAP3Q9BZ76 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CNTNAP3Q9BZ76 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CNTNAP3Q9BZ76 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC16.1■□□□□ 0.17
CNTNAP3Q9BZ76 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CNTNAP3Q9BZ76 PCDHB18P-201ENST00000524813 2368 ntBASIC16.09■□□□□ 0.17
CNTNAP3Q9BZ76 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CNTNAP3Q9BZ76 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CNTNAP3Q9BZ76 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CNTNAP3Q9BZ76 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
CNTNAP3Q9BZ76 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CNTNAP3Q9BZ76 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
CNTNAP3Q9BZ76 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
CNTNAP3Q9BZ76 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
CNTNAP3Q9BZ76 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CNTNAP3Q9BZ76 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
CNTNAP3Q9BZ76 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CNTNAP3Q9BZ76 BOLA2P3-201ENST00000404566 256 ntBASIC16.09■□□□□ 0.17
CNTNAP3Q9BZ76 SLC25A24P2-201ENST00000415059 510 ntBASIC16.09■□□□□ 0.17
CNTNAP3Q9BZ76 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC16.09■□□□□ 0.17
CNTNAP3Q9BZ76 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
CNTNAP3Q9BZ76 THTPA-204ENST00000554970 569 ntTSL 4 BASIC16.09■□□□□ 0.17
CNTNAP3Q9BZ76 THTPA-206ENST00000556015 535 ntTSL 3 BASIC16.09■□□□□ 0.17
CNTNAP3Q9BZ76 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC16.09■□□□□ 0.17
CNTNAP3Q9BZ76 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
CNTNAP3Q9BZ76 AC016629.1-201ENST00000596579 586 ntBASIC16.09■□□□□ 0.17
CNTNAP3Q9BZ76 AC243960.2-201ENST00000600996 747 ntBASIC16.09■□□□□ 0.17
CNTNAP3Q9BZ76 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CNTNAP3Q9BZ76 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CNTNAP3Q9BZ76 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CNTNAP3Q9BZ76 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CNTNAP3Q9BZ76 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CNTNAP3Q9BZ76 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CNTNAP3Q9BZ76 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CNTNAP3Q9BZ76 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CNTNAP3Q9BZ76 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC16.09■□□□□ 0.17
CNTNAP3Q9BZ76 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC16.09■□□□□ 0.17
CNTNAP3Q9BZ76 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CNTNAP3Q9BZ76 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC16.09■□□□□ 0.17
CNTNAP3Q9BZ76 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC16.08■□□□□ 0.17
CNTNAP3Q9BZ76 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CNTNAP3Q9BZ76 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CNTNAP3Q9BZ76 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC16.08■□□□□ 0.17
CNTNAP3Q9BZ76 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
CNTNAP3Q9BZ76 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
CNTNAP3Q9BZ76 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CNTNAP3Q9BZ76 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC16.08■□□□□ 0.16
CNTNAP3Q9BZ76 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
CNTNAP3Q9BZ76 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CNTNAP3Q9BZ76 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC16.08■□□□□ 0.16
CNTNAP3Q9BZ76 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC16.08■□□□□ 0.16
CNTNAP3Q9BZ76 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC16.08■□□□□ 0.16
CNTNAP3Q9BZ76 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC16.08■□□□□ 0.16
CNTNAP3Q9BZ76 NEU3-203ENST00000529024 581 ntTSL 3 BASIC16.08■□□□□ 0.16
CNTNAP3Q9BZ76 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC16.08■□□□□ 0.16
CNTNAP3Q9BZ76 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC16.08■□□□□ 0.16
CNTNAP3Q9BZ76 AC090164.3-201ENST00000610780 2143 ntBASIC16.08■□□□□ 0.16
CNTNAP3Q9BZ76 AL021578.1-201ENST00000613646 709 ntBASIC16.08■□□□□ 0.16
CNTNAP3Q9BZ76 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC16.08■□□□□ 0.16
CNTNAP3Q9BZ76 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CNTNAP3Q9BZ76 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CNTNAP3Q9BZ76 TUBB1P2-201ENST00000422712 1306 ntBASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms