Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
HDHD3Q9BSH5 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC14.35□□□□□ -0.11
HDHD3Q9BSH5 STK24-203ENST00000397517 4578 ntTSL 2 BASIC14.35□□□□□ -0.11
HDHD3Q9BSH5 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HDHD3Q9BSH5 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
HDHD3Q9BSH5 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC14.35□□□□□ -0.11
HDHD3Q9BSH5 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HDHD3Q9BSH5 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
HDHD3Q9BSH5 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HDHD3Q9BSH5 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HDHD3Q9BSH5 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
HDHD3Q9BSH5 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
HDHD3Q9BSH5 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HDHD3Q9BSH5 PGR-209ENST00000617858 2816 ntTSL 5 BASIC14.35□□□□□ -0.11
HDHD3Q9BSH5 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HDHD3Q9BSH5 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC14.35□□□□□ -0.11
HDHD3Q9BSH5 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
HDHD3Q9BSH5 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HDHD3Q9BSH5 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
HDHD3Q9BSH5 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
HDHD3Q9BSH5 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
HDHD3Q9BSH5 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
HDHD3Q9BSH5 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HDHD3Q9BSH5 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
HDHD3Q9BSH5 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HDHD3Q9BSH5 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC14.34□□□□□ -0.11
HDHD3Q9BSH5 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC14.34□□□□□ -0.11
HDHD3Q9BSH5 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HDHD3Q9BSH5 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
HDHD3Q9BSH5 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HDHD3Q9BSH5 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
HDHD3Q9BSH5 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HDHD3Q9BSH5 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HDHD3Q9BSH5 LTF-203ENST00000426532 2494 ntTSL 2 BASIC14.34□□□□□ -0.11
HDHD3Q9BSH5 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HDHD3Q9BSH5 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
HDHD3Q9BSH5 AMT-206ENST00000458307 1860 ntTSL 2 BASIC14.34□□□□□ -0.11
HDHD3Q9BSH5 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HDHD3Q9BSH5 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
HDHD3Q9BSH5 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HDHD3Q9BSH5 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HDHD3Q9BSH5 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
HDHD3Q9BSH5 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HDHD3Q9BSH5 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
HDHD3Q9BSH5 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HDHD3Q9BSH5 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HDHD3Q9BSH5 CHCHD2P8-201ENST00000429873 447 ntBASIC14.34□□□□□ -0.11
HDHD3Q9BSH5 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC14.34□□□□□ -0.11
HDHD3Q9BSH5 DANCR-204ENST00000444958 709 ntTSL 3 BASIC14.34□□□□□ -0.11
HDHD3Q9BSH5 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HDHD3Q9BSH5 BX276092.5-203ENST00000456199 560 ntBASIC14.34□□□□□ -0.11
HDHD3Q9BSH5 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC14.34□□□□□ -0.11
HDHD3Q9BSH5 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
HDHD3Q9BSH5 LTBR-211ENST00000543190 785 ntTSL 3 BASIC14.34□□□□□ -0.11
HDHD3Q9BSH5 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC14.34□□□□□ -0.11
HDHD3Q9BSH5 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC14.34□□□□□ -0.11
HDHD3Q9BSH5 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HDHD3Q9BSH5 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC14.34□□□□□ -0.11
HDHD3Q9BSH5 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
HDHD3Q9BSH5 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
HDHD3Q9BSH5 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC14.34□□□□□ -0.11
HDHD3Q9BSH5 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
HDHD3Q9BSH5 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HDHD3Q9BSH5 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC14.34□□□□□ -0.11
HDHD3Q9BSH5 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC14.34□□□□□ -0.11
HDHD3Q9BSH5 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HDHD3Q9BSH5 TUBB8P12-201ENST00000308911 1335 ntBASIC14.34□□□□□ -0.11
HDHD3Q9BSH5 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC14.34□□□□□ -0.11
HDHD3Q9BSH5 TUBB7P-202ENST00000428444 1305 ntBASIC14.34□□□□□ -0.11
HDHD3Q9BSH5 TUBB8P7-204ENST00000567960 1332 ntBASIC14.34□□□□□ -0.11
HDHD3Q9BSH5 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC14.34□□□□□ -0.11
HDHD3Q9BSH5 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HDHD3Q9BSH5 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HDHD3Q9BSH5 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HDHD3Q9BSH5 AL513523.2-202ENST00000427283 2040 ntBASIC14.34□□□□□ -0.11
HDHD3Q9BSH5 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
HDHD3Q9BSH5 AC016734.2-201ENST00000624325 1377 ntBASIC14.34□□□□□ -0.11
HDHD3Q9BSH5 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
HDHD3Q9BSH5 AC007950.2-201ENST00000615045 2347 ntBASIC14.33□□□□□ -0.11
HDHD3Q9BSH5 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
HDHD3Q9BSH5 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.11
HDHD3Q9BSH5 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC14.33□□□□□ -0.11
HDHD3Q9BSH5 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
HDHD3Q9BSH5 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
HDHD3Q9BSH5 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
HDHD3Q9BSH5 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
HDHD3Q9BSH5 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
HDHD3Q9BSH5 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HDHD3Q9BSH5 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC14.33□□□□□ -0.12
HDHD3Q9BSH5 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
HDHD3Q9BSH5 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
HDHD3Q9BSH5 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC14.33□□□□□ -0.12
HDHD3Q9BSH5 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
HDHD3Q9BSH5 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
HDHD3Q9BSH5 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
HDHD3Q9BSH5 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
HDHD3Q9BSH5 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
HDHD3Q9BSH5 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC14.33□□□□□ -0.12
HDHD3Q9BSH5 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HDHD3Q9BSH5 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms