Protein–RNA interactions for Protein: Q99836

MYD88, Myeloid differentiation primary response protein MyD88, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MYD88Q99836 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC21.19■□□□□ 0.98
MYD88Q99836 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
MYD88Q99836 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
MYD88Q99836 AC005332.8-201ENST00000622750 2735 ntBASIC21.19■□□□□ 0.98
MYD88Q99836 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
MYD88Q99836 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
MYD88Q99836 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
MYD88Q99836 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
MYD88Q99836 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
MYD88Q99836 PCDHB18P-201ENST00000524813 2368 ntBASIC21.18■□□□□ 0.98
MYD88Q99836 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
MYD88Q99836 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
MYD88Q99836 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
MYD88Q99836 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
MYD88Q99836 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC21.18■□□□□ 0.98
MYD88Q99836 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC21.18■□□□□ 0.98
MYD88Q99836 AC009093.7-201ENST00000623853 1223 ntBASIC21.18■□□□□ 0.98
MYD88Q99836 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
MYD88Q99836 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC21.18■□□□□ 0.98
MYD88Q99836 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
MYD88Q99836 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
MYD88Q99836 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC21.18■□□□□ 0.98
MYD88Q99836 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC21.18■□□□□ 0.98
MYD88Q99836 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
MYD88Q99836 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
MYD88Q99836 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC21.18■□□□□ 0.98
MYD88Q99836 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
MYD88Q99836 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
MYD88Q99836 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC21.17■□□□□ 0.98
MYD88Q99836 SLC9A3P2-201ENST00000447821 2021 ntBASIC21.17■□□□□ 0.98
MYD88Q99836 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
MYD88Q99836 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
MYD88Q99836 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
MYD88Q99836 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC21.17■□□□□ 0.98
MYD88Q99836 PMS2P4-201ENST00000412466 1052 ntBASIC21.17■□□□□ 0.98
MYD88Q99836 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
MYD88Q99836 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC21.17■□□□□ 0.98
MYD88Q99836 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
MYD88Q99836 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC21.17■□□□□ 0.98
MYD88Q99836 RPL28-205ENST00000558131 444 ntTSL 5 BASIC21.17■□□□□ 0.98
MYD88Q99836 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
MYD88Q99836 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC21.17■□□□□ 0.98
MYD88Q99836 BSG-215ENST00000618006 1329 ntTSL 2 BASIC21.17■□□□□ 0.98
MYD88Q99836 WASH6P-202ENST00000359512 1437 ntBASIC21.17■□□□□ 0.98
MYD88Q99836 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
MYD88Q99836 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
MYD88Q99836 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC21.17■□□□□ 0.98
MYD88Q99836 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
MYD88Q99836 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC21.17■□□□□ 0.98
MYD88Q99836 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
MYD88Q99836 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
MYD88Q99836 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
MYD88Q99836 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
MYD88Q99836 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC21.17■□□□□ 0.98
MYD88Q99836 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
MYD88Q99836 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
MYD88Q99836 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
MYD88Q99836 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
MYD88Q99836 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
MYD88Q99836 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
MYD88Q99836 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC21.16■□□□□ 0.98
MYD88Q99836 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
MYD88Q99836 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
MYD88Q99836 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
MYD88Q99836 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
MYD88Q99836 AC016027.1-202ENST00000607927 1699 ntBASIC21.16■□□□□ 0.98
MYD88Q99836 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
MYD88Q99836 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
MYD88Q99836 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
MYD88Q99836 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
MYD88Q99836 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
MYD88Q99836 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC21.16■□□□□ 0.98
MYD88Q99836 PNMT-202ENST00000394246 821 ntTSL 2 BASIC21.16■□□□□ 0.98
MYD88Q99836 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC21.16■□□□□ 0.98
MYD88Q99836 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC21.16■□□□□ 0.98
MYD88Q99836 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC21.16■□□□□ 0.98
MYD88Q99836 LINC01225-203ENST00000563550 1244 ntBASIC21.16■□□□□ 0.98
MYD88Q99836 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
MYD88Q99836 MIR3909-201ENST00000579518 119 ntBASIC21.16■□□□□ 0.98
MYD88Q99836 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC21.16■□□□□ 0.98
MYD88Q99836 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
MYD88Q99836 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC21.16■□□□□ 0.98
MYD88Q99836 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
MYD88Q99836 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC21.16■□□□□ 0.98
MYD88Q99836 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
MYD88Q99836 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
MYD88Q99836 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
MYD88Q99836 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC21.16■□□□□ 0.98
MYD88Q99836 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
MYD88Q99836 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC21.16■□□□□ 0.98
MYD88Q99836 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
MYD88Q99836 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
MYD88Q99836 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
MYD88Q99836 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
MYD88Q99836 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
MYD88Q99836 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC21.15■□□□□ 0.98
MYD88Q99836 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
MYD88Q99836 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
MYD88Q99836 PCDHB17P-201ENST00000539533 2393 ntBASIC21.15■□□□□ 0.98
MYD88Q99836 TUBB8P12-201ENST00000308911 1335 ntBASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms