Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC19.82■□□□□ 0.76
TRIM47Q96LD4 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC19.82■□□□□ 0.76
TRIM47Q96LD4 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC19.82■□□□□ 0.76
TRIM47Q96LD4 YTHDF3-AS1-201ENST00000603538 718 ntBASIC19.82■□□□□ 0.76
TRIM47Q96LD4 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
TRIM47Q96LD4 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
TRIM47Q96LD4 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
TRIM47Q96LD4 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRIM47Q96LD4 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRIM47Q96LD4 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRIM47Q96LD4 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
TRIM47Q96LD4 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRIM47Q96LD4 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC19.82■□□□□ 0.76
TRIM47Q96LD4 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TRIM47Q96LD4 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC19.82■□□□□ 0.76
TRIM47Q96LD4 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC19.82■□□□□ 0.76
TRIM47Q96LD4 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRIM47Q96LD4 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRIM47Q96LD4 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
TRIM47Q96LD4 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
TRIM47Q96LD4 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM47Q96LD4 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC19.81■□□□□ 0.76
TRIM47Q96LD4 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM47Q96LD4 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM47Q96LD4 AL590787.1-201ENST00000568856 1315 ntBASIC19.81■□□□□ 0.76
TRIM47Q96LD4 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC19.81■□□□□ 0.76
TRIM47Q96LD4 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC19.81■□□□□ 0.76
TRIM47Q96LD4 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM47Q96LD4 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC19.81■□□□□ 0.76
TRIM47Q96LD4 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM47Q96LD4 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC19.81■□□□□ 0.76
TRIM47Q96LD4 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM47Q96LD4 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM47Q96LD4 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC19.81■□□□□ 0.76
TRIM47Q96LD4 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM47Q96LD4 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM47Q96LD4 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM47Q96LD4 AC002056.1-201ENST00000395613 760 ntBASIC19.81■□□□□ 0.76
TRIM47Q96LD4 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC19.81■□□□□ 0.76
TRIM47Q96LD4 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC19.81■□□□□ 0.76
TRIM47Q96LD4 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM47Q96LD4 AC099522.2-201ENST00000607001 744 ntBASIC19.81■□□□□ 0.76
TRIM47Q96LD4 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC19.81■□□□□ 0.76
TRIM47Q96LD4 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM47Q96LD4 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC19.81■□□□□ 0.76
TRIM47Q96LD4 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC19.81■□□□□ 0.76
TRIM47Q96LD4 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC19.81■□□□□ 0.76
TRIM47Q96LD4 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM47Q96LD4 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC19.81■□□□□ 0.76
TRIM47Q96LD4 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
TRIM47Q96LD4 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC19.81■□□□□ 0.76
TRIM47Q96LD4 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM47Q96LD4 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM47Q96LD4 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM47Q96LD4 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM47Q96LD4 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC19.81■□□□□ 0.76
TRIM47Q96LD4 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC19.81■□□□□ 0.76
TRIM47Q96LD4 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC19.8■□□□□ 0.76
TRIM47Q96LD4 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRIM47Q96LD4 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC19.8■□□□□ 0.76
TRIM47Q96LD4 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC19.8■□□□□ 0.76
TRIM47Q96LD4 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TRIM47Q96LD4 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC19.8■□□□□ 0.76
TRIM47Q96LD4 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TRIM47Q96LD4 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRIM47Q96LD4 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRIM47Q96LD4 AL671277.1-201ENST00000429656 993 ntBASIC19.8■□□□□ 0.76
TRIM47Q96LD4 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC19.8■□□□□ 0.76
TRIM47Q96LD4 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC19.8■□□□□ 0.76
TRIM47Q96LD4 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TRIM47Q96LD4 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC19.8■□□□□ 0.76
TRIM47Q96LD4 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC19.8■□□□□ 0.76
TRIM47Q96LD4 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC19.8■□□□□ 0.76
TRIM47Q96LD4 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
TRIM47Q96LD4 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRIM47Q96LD4 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRIM47Q96LD4 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRIM47Q96LD4 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRIM47Q96LD4 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TRIM47Q96LD4 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC19.8■□□□□ 0.76
TRIM47Q96LD4 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRIM47Q96LD4 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
TRIM47Q96LD4 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TRIM47Q96LD4 AL645608.8-201ENST00000606034 2086 ntBASIC19.8■□□□□ 0.76
TRIM47Q96LD4 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRIM47Q96LD4 HARS-201ENST00000307633 1780 ntTSL 2 BASIC19.8■□□□□ 0.76
TRIM47Q96LD4 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRIM47Q96LD4 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRIM47Q96LD4 BSG-215ENST00000618006 1329 ntTSL 2 BASIC19.79■□□□□ 0.76
TRIM47Q96LD4 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC19.79■□□□□ 0.76
TRIM47Q96LD4 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRIM47Q96LD4 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TRIM47Q96LD4 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
TRIM47Q96LD4 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TRIM47Q96LD4 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TRIM47Q96LD4 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TRIM47Q96LD4 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TRIM47Q96LD4 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC19.79■□□□□ 0.76
TRIM47Q96LD4 MIR943-201ENST00000401286 94 ntBASIC19.79■□□□□ 0.76
TRIM47Q96LD4 TFAMP1-201ENST00000412727 736 ntBASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms