Protein–RNA interactions for Protein: Q92888

ARHGEF1, Rho guanine nucleotide exchange factor 1, humanhuman

Known RBP Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1Q92888 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
ARHGEF1Q92888 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
ARHGEF1Q92888 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ARHGEF1Q92888 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
ARHGEF1Q92888 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
ARHGEF1Q92888 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC21.02■□□□□ 0.96
ARHGEF1Q92888 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ARHGEF1Q92888 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
ARHGEF1Q92888 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
ARHGEF1Q92888 AL391825.1-201ENST00000457671 1364 ntBASIC21.02■□□□□ 0.96
ARHGEF1Q92888 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ARHGEF1Q92888 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ARHGEF1Q92888 SPDYE19P-201ENST00000338590 713 ntBASIC21.02■□□□□ 0.96
ARHGEF1Q92888 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
ARHGEF1Q92888 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ARHGEF1Q92888 AC087499.6-201ENST00000411576 835 ntBASIC21.02■□□□□ 0.96
ARHGEF1Q92888 RASL12-203ENST00000434605 982 ntTSL 2 BASIC21.02■□□□□ 0.96
ARHGEF1Q92888 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC21.02■□□□□ 0.96
ARHGEF1Q92888 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
ARHGEF1Q92888 AC098859.1-201ENST00000502915 1238 ntBASIC21.02■□□□□ 0.96
ARHGEF1Q92888 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC21.02■□□□□ 0.96
ARHGEF1Q92888 AC008494.3-201ENST00000606615 944 ntBASIC21.02■□□□□ 0.96
ARHGEF1Q92888 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC21.02■□□□□ 0.96
ARHGEF1Q92888 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
ARHGEF1Q92888 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
ARHGEF1Q92888 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
ARHGEF1Q92888 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ARHGEF1Q92888 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
ARHGEF1Q92888 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
ARHGEF1Q92888 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC21.02■□□□□ 0.95
ARHGEF1Q92888 STX3-203ENST00000529177 1571 ntTSL 2 BASIC21.02■□□□□ 0.95
ARHGEF1Q92888 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
ARHGEF1Q92888 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ARHGEF1Q92888 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
ARHGEF1Q92888 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
ARHGEF1Q92888 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
ARHGEF1Q92888 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
ARHGEF1Q92888 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
ARHGEF1Q92888 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC21.01■□□□□ 0.95
ARHGEF1Q92888 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC21.01■□□□□ 0.95
ARHGEF1Q92888 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
ARHGEF1Q92888 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC21.01■□□□□ 0.95
ARHGEF1Q92888 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
ARHGEF1Q92888 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
ARHGEF1Q92888 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC21.01■□□□□ 0.95
ARHGEF1Q92888 AC016396.2-201ENST00000562575 1417 ntBASIC21.01■□□□□ 0.95
ARHGEF1Q92888 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ARHGEF1Q92888 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC21■□□□□ 0.95
ARHGEF1Q92888 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC21■□□□□ 0.95
ARHGEF1Q92888 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC21■□□□□ 0.95
ARHGEF1Q92888 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
ARHGEF1Q92888 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
ARHGEF1Q92888 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC21■□□□□ 0.95
ARHGEF1Q92888 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
ARHGEF1Q92888 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
ARHGEF1Q92888 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC21■□□□□ 0.95
ARHGEF1Q92888 DOC2GP-202ENST00000514950 1163 ntBASIC21■□□□□ 0.95
ARHGEF1Q92888 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC21■□□□□ 0.95
ARHGEF1Q92888 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC21■□□□□ 0.95
ARHGEF1Q92888 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC21■□□□□ 0.95
ARHGEF1Q92888 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC21■□□□□ 0.95
ARHGEF1Q92888 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC21■□□□□ 0.95
ARHGEF1Q92888 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC21■□□□□ 0.95
ARHGEF1Q92888 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC21■□□□□ 0.95
ARHGEF1Q92888 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC21■□□□□ 0.95
ARHGEF1Q92888 AC108860.2-201ENST00000562760 2183 ntBASIC21■□□□□ 0.95
ARHGEF1Q92888 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC21■□□□□ 0.95
ARHGEF1Q92888 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC21■□□□□ 0.95
ARHGEF1Q92888 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC21■□□□□ 0.95
ARHGEF1Q92888 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
ARHGEF1Q92888 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC21■□□□□ 0.95
ARHGEF1Q92888 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC21■□□□□ 0.95
ARHGEF1Q92888 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
ARHGEF1Q92888 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC21■□□□□ 0.95
ARHGEF1Q92888 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
ARHGEF1Q92888 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
ARHGEF1Q92888 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
ARHGEF1Q92888 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
ARHGEF1Q92888 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC20.99■□□□□ 0.95
ARHGEF1Q92888 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.99■□□□□ 0.95
ARHGEF1Q92888 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC20.99■□□□□ 0.95
ARHGEF1Q92888 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC20.99■□□□□ 0.95
ARHGEF1Q92888 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC20.99■□□□□ 0.95
ARHGEF1Q92888 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
ARHGEF1Q92888 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
ARHGEF1Q92888 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
ARHGEF1Q92888 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
ARHGEF1Q92888 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
ARHGEF1Q92888 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC20.99■□□□□ 0.95
ARHGEF1Q92888 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC20.99■□□□□ 0.95
ARHGEF1Q92888 SLC25A6P5-201ENST00000435663 894 ntBASIC20.99■□□□□ 0.95
ARHGEF1Q92888 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
ARHGEF1Q92888 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
ARHGEF1Q92888 SPDYE18-201ENST00000510091 1050 ntBASIC20.99■□□□□ 0.95
ARHGEF1Q92888 RNA5SP410-201ENST00000516285 106 ntBASIC20.99■□□□□ 0.95
ARHGEF1Q92888 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
ARHGEF1Q92888 KRT17P8-201ENST00000540749 863 ntBASIC20.99■□□□□ 0.95
ARHGEF1Q92888 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
ARHGEF1Q92888 AL512361.1-201ENST00000554200 418 ntBASIC20.99■□□□□ 0.95
ARHGEF1Q92888 NAA38-206ENST00000576384 424 ntTSL 2 BASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms