Protein–RNA interactions for Protein: Q8WVD3

RNF138, E3 ubiquitin-protein ligase RNF138, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF138Q8WVD3 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
RNF138Q8WVD3 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC15.21■□□□□ 0.03
RNF138Q8WVD3 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
RNF138Q8WVD3 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC15.21■□□□□ 0.03
RNF138Q8WVD3 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC15.21■□□□□ 0.03
RNF138Q8WVD3 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC15.21■□□□□ 0.03
RNF138Q8WVD3 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC15.21■□□□□ 0.03
RNF138Q8WVD3 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
RNF138Q8WVD3 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC15.21■□□□□ 0.03
RNF138Q8WVD3 AC005829.1-201ENST00000570002 483 ntBASIC15.21■□□□□ 0.03
RNF138Q8WVD3 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC15.21■□□□□ 0.03
RNF138Q8WVD3 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC15.21■□□□□ 0.03
RNF138Q8WVD3 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
RNF138Q8WVD3 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RNF138Q8WVD3 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RNF138Q8WVD3 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RNF138Q8WVD3 GGT3P-204ENST00000453783 1664 ntBASIC15.21■□□□□ 0.03
RNF138Q8WVD3 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RNF138Q8WVD3 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
RNF138Q8WVD3 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC15.21■□□□□ 0.02
RNF138Q8WVD3 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
RNF138Q8WVD3 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
RNF138Q8WVD3 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
RNF138Q8WVD3 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
RNF138Q8WVD3 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RNF138Q8WVD3 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RNF138Q8WVD3 AKAP8P1-201ENST00000434743 1349 ntBASIC15.2■□□□□ 0.02
RNF138Q8WVD3 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RNF138Q8WVD3 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RNF138Q8WVD3 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC15.2■□□□□ 0.02
RNF138Q8WVD3 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC15.2■□□□□ 0.02
RNF138Q8WVD3 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RNF138Q8WVD3 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
RNF138Q8WVD3 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RNF138Q8WVD3 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
RNF138Q8WVD3 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
RNF138Q8WVD3 WASH6P-202ENST00000359512 1437 ntBASIC15.2■□□□□ 0.02
RNF138Q8WVD3 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RNF138Q8WVD3 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
RNF138Q8WVD3 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
RNF138Q8WVD3 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RNF138Q8WVD3 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC15.2■□□□□ 0.02
RNF138Q8WVD3 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
RNF138Q8WVD3 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RNF138Q8WVD3 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RNF138Q8WVD3 NEK7-201ENST00000367383 586 ntTSL 2 BASIC15.2■□□□□ 0.02
RNF138Q8WVD3 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC15.2■□□□□ 0.02
RNF138Q8WVD3 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RNF138Q8WVD3 RPS15-207ENST00000591032 550 ntTSL 3 BASIC15.2■□□□□ 0.02
RNF138Q8WVD3 AC010327.4-202ENST00000591484 748 ntBASIC15.2■□□□□ 0.02
RNF138Q8WVD3 RPS15-212ENST00000593052 629 ntTSL 2 BASIC15.2■□□□□ 0.02
RNF138Q8WVD3 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RNF138Q8WVD3 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RNF138Q8WVD3 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC15.2■□□□□ 0.02
RNF138Q8WVD3 GPAA1P2-202ENST00000606848 1787 ntBASIC15.2■□□□□ 0.02
RNF138Q8WVD3 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
RNF138Q8WVD3 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RNF138Q8WVD3 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RNF138Q8WVD3 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
RNF138Q8WVD3 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RNF138Q8WVD3 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
RNF138Q8WVD3 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC15.2■□□□□ 0.02
RNF138Q8WVD3 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
RNF138Q8WVD3 FLJ38576-201ENST00000623820 2459 ntBASIC15.2■□□□□ 0.02
RNF138Q8WVD3 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RNF138Q8WVD3 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RNF138Q8WVD3 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RNF138Q8WVD3 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RNF138Q8WVD3 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RNF138Q8WVD3 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC15.19■□□□□ 0.02
RNF138Q8WVD3 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
RNF138Q8WVD3 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RNF138Q8WVD3 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RNF138Q8WVD3 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC15.19■□□□□ 0.02
RNF138Q8WVD3 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RNF138Q8WVD3 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
RNF138Q8WVD3 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RNF138Q8WVD3 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RNF138Q8WVD3 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
RNF138Q8WVD3 KRT18P13-201ENST00000400056 1290 ntBASIC15.19■□□□□ 0.02
RNF138Q8WVD3 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RNF138Q8WVD3 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC15.19■□□□□ 0.02
RNF138Q8WVD3 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC15.19■□□□□ 0.02
RNF138Q8WVD3 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC15.19■□□□□ 0.02
RNF138Q8WVD3 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC15.19■□□□□ 0.02
RNF138Q8WVD3 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC15.19■□□□□ 0.02
RNF138Q8WVD3 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC15.19■□□□□ 0.02
RNF138Q8WVD3 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC15.19■□□□□ 0.02
RNF138Q8WVD3 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC15.19■□□□□ 0.02
RNF138Q8WVD3 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC15.19■□□□□ 0.02
RNF138Q8WVD3 RARRES2P8-201ENST00000566335 367 ntBASIC15.19■□□□□ 0.02
RNF138Q8WVD3 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC15.19■□□□□ 0.02
RNF138Q8WVD3 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
RNF138Q8WVD3 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC15.19■□□□□ 0.02
RNF138Q8WVD3 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
RNF138Q8WVD3 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RNF138Q8WVD3 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
RNF138Q8WVD3 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RNF138Q8WVD3 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RNF138Q8WVD3 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms