Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
COL22A1Q8NFW1 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
COL22A1Q8NFW1 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
COL22A1Q8NFW1 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC22.19■■□□□ 1.14
COL22A1Q8NFW1 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
COL22A1Q8NFW1 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC22.19■■□□□ 1.14
COL22A1Q8NFW1 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC22.19■■□□□ 1.14
COL22A1Q8NFW1 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC22.19■■□□□ 1.14
COL22A1Q8NFW1 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
COL22A1Q8NFW1 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
COL22A1Q8NFW1 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
COL22A1Q8NFW1 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
COL22A1Q8NFW1 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC22.19■■□□□ 1.14
COL22A1Q8NFW1 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC22.18■■□□□ 1.14
COL22A1Q8NFW1 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
COL22A1Q8NFW1 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC22.18■■□□□ 1.14
COL22A1Q8NFW1 AC108860.2-201ENST00000562760 2183 ntBASIC22.18■■□□□ 1.14
COL22A1Q8NFW1 CDC14C-201ENST00000428251 1719 ntBASIC22.18■■□□□ 1.14
COL22A1Q8NFW1 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
COL22A1Q8NFW1 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
COL22A1Q8NFW1 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
COL22A1Q8NFW1 BRWD1P1-201ENST00000401091 371 ntBASIC22.18■■□□□ 1.14
COL22A1Q8NFW1 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC22.18■■□□□ 1.14
COL22A1Q8NFW1 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC22.18■■□□□ 1.14
COL22A1Q8NFW1 AC024267.1-201ENST00000582320 895 ntBASIC22.18■■□□□ 1.14
COL22A1Q8NFW1 AC243960.2-201ENST00000600996 747 ntBASIC22.18■■□□□ 1.14
COL22A1Q8NFW1 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
COL22A1Q8NFW1 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC22.18■■□□□ 1.14
COL22A1Q8NFW1 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
COL22A1Q8NFW1 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC22.18■■□□□ 1.14
COL22A1Q8NFW1 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC22.18■■□□□ 1.14
COL22A1Q8NFW1 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
COL22A1Q8NFW1 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC22.18■■□□□ 1.14
COL22A1Q8NFW1 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
COL22A1Q8NFW1 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
COL22A1Q8NFW1 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
COL22A1Q8NFW1 AL162726.2-201ENST00000438986 1017 ntBASIC22.17■■□□□ 1.14
COL22A1Q8NFW1 KLF2P4-201ENST00000451959 1225 ntBASIC22.17■■□□□ 1.14
COL22A1Q8NFW1 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC22.17■■□□□ 1.14
COL22A1Q8NFW1 FO681548.1-201ENST00000455617 1132 ntBASIC22.17■■□□□ 1.14
COL22A1Q8NFW1 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC22.17■■□□□ 1.14
COL22A1Q8NFW1 RNA5SP423-201ENST00000517127 109 ntBASIC22.17■■□□□ 1.14
COL22A1Q8NFW1 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC22.17■■□□□ 1.14
COL22A1Q8NFW1 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
COL22A1Q8NFW1 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
COL22A1Q8NFW1 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
COL22A1Q8NFW1 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC22.17■■□□□ 1.14
COL22A1Q8NFW1 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.14
COL22A1Q8NFW1 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
COL22A1Q8NFW1 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC22.17■■□□□ 1.14
COL22A1Q8NFW1 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
COL22A1Q8NFW1 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
COL22A1Q8NFW1 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
COL22A1Q8NFW1 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
COL22A1Q8NFW1 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
COL22A1Q8NFW1 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
COL22A1Q8NFW1 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC22.17■■□□□ 1.14
COL22A1Q8NFW1 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC22.17■■□□□ 1.14
COL22A1Q8NFW1 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
COL22A1Q8NFW1 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
COL22A1Q8NFW1 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC22.17■■□□□ 1.14
COL22A1Q8NFW1 FAM21FP-201ENST00000426241 1131 ntBASIC22.17■■□□□ 1.14
COL22A1Q8NFW1 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC22.17■■□□□ 1.14
COL22A1Q8NFW1 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC22.17■■□□□ 1.14
COL22A1Q8NFW1 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
COL22A1Q8NFW1 AC025048.3-201ENST00000590609 569 ntBASIC22.17■■□□□ 1.14
COL22A1Q8NFW1 AC005702.4-201ENST00000618393 416 ntBASIC22.17■■□□□ 1.14
COL22A1Q8NFW1 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
COL22A1Q8NFW1 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
COL22A1Q8NFW1 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC22.16■■□□□ 1.14
COL22A1Q8NFW1 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC22.16■■□□□ 1.14
COL22A1Q8NFW1 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
COL22A1Q8NFW1 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
COL22A1Q8NFW1 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC22.16■■□□□ 1.14
COL22A1Q8NFW1 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
COL22A1Q8NFW1 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
COL22A1Q8NFW1 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC22.16■■□□□ 1.14
COL22A1Q8NFW1 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
COL22A1Q8NFW1 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC22.16■■□□□ 1.14
COL22A1Q8NFW1 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
COL22A1Q8NFW1 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
COL22A1Q8NFW1 AC093724.1-201ENST00000448659 1027 ntBASIC22.16■■□□□ 1.14
COL22A1Q8NFW1 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC22.16■■□□□ 1.14
COL22A1Q8NFW1 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC22.16■■□□□ 1.14
COL22A1Q8NFW1 APRT-204ENST00000563655 709 ntTSL 5 BASIC22.16■■□□□ 1.14
COL22A1Q8NFW1 RARRES2P5-201ENST00000564013 466 ntBASIC22.16■■□□□ 1.14
COL22A1Q8NFW1 PIGL-212ENST00000581006 554 ntTSL 4 BASIC22.16■■□□□ 1.14
COL22A1Q8NFW1 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC22.16■■□□□ 1.14
COL22A1Q8NFW1 RPS15-212ENST00000593052 629 ntTSL 2 BASIC22.16■■□□□ 1.14
COL22A1Q8NFW1 BTNL10-201ENST00000595971 695 ntBASIC22.16■■□□□ 1.14
COL22A1Q8NFW1 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC22.16■■□□□ 1.14
COL22A1Q8NFW1 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC22.16■■□□□ 1.14
COL22A1Q8NFW1 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
COL22A1Q8NFW1 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
COL22A1Q8NFW1 BX323043.1-201ENST00000641006 1765 ntBASIC22.16■■□□□ 1.14
COL22A1Q8NFW1 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC22.15■■□□□ 1.14
COL22A1Q8NFW1 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC22.15■■□□□ 1.14
COL22A1Q8NFW1 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC22.15■■□□□ 1.14
COL22A1Q8NFW1 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
COL22A1Q8NFW1 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC22.15■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms