Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDH20Q8N6Y1 CROCCP2-202ENST00000412962 2773 ntBASIC17.32■□□□□ 0.36
PCDH20Q8N6Y1 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDH20Q8N6Y1 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDH20Q8N6Y1 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
PCDH20Q8N6Y1 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDH20Q8N6Y1 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC17.32■□□□□ 0.36
PCDH20Q8N6Y1 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC17.32■□□□□ 0.36
PCDH20Q8N6Y1 COX10-202ENST00000429152 875 ntTSL 2 BASIC17.32■□□□□ 0.36
PCDH20Q8N6Y1 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC17.32■□□□□ 0.36
PCDH20Q8N6Y1 KRT18P2-201ENST00000447938 1258 ntBASIC17.32■□□□□ 0.36
PCDH20Q8N6Y1 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC17.32■□□□□ 0.36
PCDH20Q8N6Y1 POLD4-207ENST00000531239 584 ntTSL 2 BASIC17.32■□□□□ 0.36
PCDH20Q8N6Y1 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC17.32■□□□□ 0.36
PCDH20Q8N6Y1 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC17.32■□□□□ 0.36
PCDH20Q8N6Y1 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC17.32■□□□□ 0.36
PCDH20Q8N6Y1 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC17.32■□□□□ 0.36
PCDH20Q8N6Y1 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
PCDH20Q8N6Y1 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC17.32■□□□□ 0.36
PCDH20Q8N6Y1 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDH20Q8N6Y1 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
PCDH20Q8N6Y1 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.32■□□□□ 0.36
PCDH20Q8N6Y1 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17.32■□□□□ 0.36
PCDH20Q8N6Y1 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PCDH20Q8N6Y1 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
PCDH20Q8N6Y1 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
PCDH20Q8N6Y1 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDH20Q8N6Y1 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PCDH20Q8N6Y1 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDH20Q8N6Y1 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDH20Q8N6Y1 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
PCDH20Q8N6Y1 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDH20Q8N6Y1 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PCDH20Q8N6Y1 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC17.31■□□□□ 0.36
PCDH20Q8N6Y1 AC129492.6-201ENST00000611383 1305 ntBASIC17.31■□□□□ 0.36
PCDH20Q8N6Y1 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.31■□□□□ 0.36
PCDH20Q8N6Y1 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDH20Q8N6Y1 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
PCDH20Q8N6Y1 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
PCDH20Q8N6Y1 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDH20Q8N6Y1 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PCDH20Q8N6Y1 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC17.31■□□□□ 0.36
PCDH20Q8N6Y1 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
PCDH20Q8N6Y1 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PCDH20Q8N6Y1 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC17.31■□□□□ 0.36
PCDH20Q8N6Y1 SLC25A6P2-201ENST00000497974 877 ntBASIC17.31■□□□□ 0.36
PCDH20Q8N6Y1 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC17.31■□□□□ 0.36
PCDH20Q8N6Y1 AC096734.2-201ENST00000562054 433 ntBASIC17.31■□□□□ 0.36
PCDH20Q8N6Y1 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC17.31■□□□□ 0.36
PCDH20Q8N6Y1 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC17.31■□□□□ 0.36
PCDH20Q8N6Y1 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC17.31■□□□□ 0.36
PCDH20Q8N6Y1 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
PCDH20Q8N6Y1 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
PCDH20Q8N6Y1 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
PCDH20Q8N6Y1 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.31■□□□□ 0.36
PCDH20Q8N6Y1 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PCDH20Q8N6Y1 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PCDH20Q8N6Y1 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDH20Q8N6Y1 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDH20Q8N6Y1 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDH20Q8N6Y1 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDH20Q8N6Y1 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDH20Q8N6Y1 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.31■□□□□ 0.36
PCDH20Q8N6Y1 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
PCDH20Q8N6Y1 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PCDH20Q8N6Y1 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PCDH20Q8N6Y1 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDH20Q8N6Y1 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDH20Q8N6Y1 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.3■□□□□ 0.36
PCDH20Q8N6Y1 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC17.3■□□□□ 0.36
PCDH20Q8N6Y1 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC17.3■□□□□ 0.36
PCDH20Q8N6Y1 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
PCDH20Q8N6Y1 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDH20Q8N6Y1 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDH20Q8N6Y1 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
PCDH20Q8N6Y1 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
PCDH20Q8N6Y1 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDH20Q8N6Y1 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC17.3■□□□□ 0.36
PCDH20Q8N6Y1 BX842568.4-201ENST00000421222 227 ntBASIC17.3■□□□□ 0.36
PCDH20Q8N6Y1 RPP21-221ENST00000428040 594 ntTSL 2 BASIC17.3■□□□□ 0.36
PCDH20Q8N6Y1 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PCDH20Q8N6Y1 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDH20Q8N6Y1 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
PCDH20Q8N6Y1 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC17.3■□□□□ 0.36
PCDH20Q8N6Y1 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC17.3■□□□□ 0.36
PCDH20Q8N6Y1 AC002347.1-201ENST00000569543 541 ntBASIC17.3■□□□□ 0.36
PCDH20Q8N6Y1 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC17.3■□□□□ 0.36
PCDH20Q8N6Y1 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC17.3■□□□□ 0.36
PCDH20Q8N6Y1 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PCDH20Q8N6Y1 AC010507.1-201ENST00000633895 436 ntBASIC17.3■□□□□ 0.36
PCDH20Q8N6Y1 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
PCDH20Q8N6Y1 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
PCDH20Q8N6Y1 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDH20Q8N6Y1 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDH20Q8N6Y1 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDH20Q8N6Y1 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC17.3■□□□□ 0.36
PCDH20Q8N6Y1 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PCDH20Q8N6Y1 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC17.3■□□□□ 0.36
PCDH20Q8N6Y1 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC17.3■□□□□ 0.36
PCDH20Q8N6Y1 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms