Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CDKL3Q8IVW4 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
CDKL3Q8IVW4 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDKL3Q8IVW4 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.42■□□□□ 0.38
CDKL3Q8IVW4 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CDKL3Q8IVW4 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CDKL3Q8IVW4 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CDKL3Q8IVW4 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDKL3Q8IVW4 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC17.42■□□□□ 0.38
CDKL3Q8IVW4 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDKL3Q8IVW4 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC17.42■□□□□ 0.38
CDKL3Q8IVW4 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC17.42■□□□□ 0.38
CDKL3Q8IVW4 SAPCD2P3-201ENST00000455031 850 ntBASIC17.42■□□□□ 0.38
CDKL3Q8IVW4 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC17.42■□□□□ 0.38
CDKL3Q8IVW4 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC17.42■□□□□ 0.38
CDKL3Q8IVW4 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
CDKL3Q8IVW4 SKP2-204ENST00000508514 821 ntTSL 3 BASIC17.42■□□□□ 0.38
CDKL3Q8IVW4 IRF8-202ENST00000562492 946 ntTSL 3 BASIC17.42■□□□□ 0.38
CDKL3Q8IVW4 SDCCAG3P1-201ENST00000589292 1150 ntBASIC17.42■□□□□ 0.38
CDKL3Q8IVW4 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC17.42■□□□□ 0.38
CDKL3Q8IVW4 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDKL3Q8IVW4 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDKL3Q8IVW4 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDKL3Q8IVW4 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC17.42■□□□□ 0.38
CDKL3Q8IVW4 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CDKL3Q8IVW4 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC17.42■□□□□ 0.38
CDKL3Q8IVW4 PCDHB19P-201ENST00000570871 2371 ntBASIC17.42■□□□□ 0.38
CDKL3Q8IVW4 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC17.41■□□□□ 0.38
CDKL3Q8IVW4 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
CDKL3Q8IVW4 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDKL3Q8IVW4 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC17.41■□□□□ 0.38
CDKL3Q8IVW4 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC17.41■□□□□ 0.38
CDKL3Q8IVW4 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CDKL3Q8IVW4 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CDKL3Q8IVW4 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CDKL3Q8IVW4 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
CDKL3Q8IVW4 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDKL3Q8IVW4 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDKL3Q8IVW4 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDKL3Q8IVW4 AKR1C7P-201ENST00000305623 895 ntBASIC17.41■□□□□ 0.38
CDKL3Q8IVW4 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDKL3Q8IVW4 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CDKL3Q8IVW4 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDKL3Q8IVW4 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC17.41■□□□□ 0.38
CDKL3Q8IVW4 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC17.41■□□□□ 0.38
CDKL3Q8IVW4 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC17.41■□□□□ 0.38
CDKL3Q8IVW4 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC17.41■□□□□ 0.38
CDKL3Q8IVW4 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CDKL3Q8IVW4 AC004706.3-202ENST00000621574 984 ntBASIC17.41■□□□□ 0.38
CDKL3Q8IVW4 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.41■□□□□ 0.38
CDKL3Q8IVW4 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDKL3Q8IVW4 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC17.41■□□□□ 0.38
CDKL3Q8IVW4 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC17.41■□□□□ 0.38
CDKL3Q8IVW4 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDKL3Q8IVW4 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC17.41■□□□□ 0.38
CDKL3Q8IVW4 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
CDKL3Q8IVW4 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
CDKL3Q8IVW4 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDKL3Q8IVW4 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDKL3Q8IVW4 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC17.41■□□□□ 0.38
CDKL3Q8IVW4 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDKL3Q8IVW4 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
CDKL3Q8IVW4 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.41■□□□□ 0.38
CDKL3Q8IVW4 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDKL3Q8IVW4 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CDKL3Q8IVW4 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC17.4■□□□□ 0.38
CDKL3Q8IVW4 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDKL3Q8IVW4 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDKL3Q8IVW4 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDKL3Q8IVW4 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
CDKL3Q8IVW4 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CDKL3Q8IVW4 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC17.4■□□□□ 0.38
CDKL3Q8IVW4 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDKL3Q8IVW4 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDKL3Q8IVW4 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CDKL3Q8IVW4 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDKL3Q8IVW4 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC17.4■□□□□ 0.38
CDKL3Q8IVW4 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDKL3Q8IVW4 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDKL3Q8IVW4 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
CDKL3Q8IVW4 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDKL3Q8IVW4 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDKL3Q8IVW4 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
CDKL3Q8IVW4 HLA-J-202ENST00000469281 1241 ntBASIC17.4■□□□□ 0.38
CDKL3Q8IVW4 ARTN-206ENST00000472435 402 ntTSL 3 BASIC17.4■□□□□ 0.38
CDKL3Q8IVW4 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
CDKL3Q8IVW4 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC17.4■□□□□ 0.38
CDKL3Q8IVW4 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC17.4■□□□□ 0.38
CDKL3Q8IVW4 METTL23-204ENST00000586752 904 ntTSL 2 BASIC17.4■□□□□ 0.38
CDKL3Q8IVW4 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC17.4■□□□□ 0.38
CDKL3Q8IVW4 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC17.4■□□□□ 0.38
CDKL3Q8IVW4 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDKL3Q8IVW4 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDKL3Q8IVW4 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDKL3Q8IVW4 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC17.4■□□□□ 0.38
CDKL3Q8IVW4 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC17.4■□□□□ 0.38
CDKL3Q8IVW4 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDKL3Q8IVW4 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDKL3Q8IVW4 UBALD1-205ENST00000590891 2641 ntBASIC17.4■□□□□ 0.38
CDKL3Q8IVW4 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms