Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRRTM4Q86VH4 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRRTM4Q86VH4 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC16.6■□□□□ 0.25
LRRTM4Q86VH4 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC16.6■□□□□ 0.25
LRRTM4Q86VH4 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC16.6■□□□□ 0.25
LRRTM4Q86VH4 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
LRRTM4Q86VH4 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LRRTM4Q86VH4 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRRTM4Q86VH4 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRRTM4Q86VH4 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRRTM4Q86VH4 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRRTM4Q86VH4 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
LRRTM4Q86VH4 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRRTM4Q86VH4 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC16.6■□□□□ 0.25
LRRTM4Q86VH4 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LRRTM4Q86VH4 FALEC-201ENST00000416894 566 ntTSL 3 BASIC16.6■□□□□ 0.25
LRRTM4Q86VH4 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC16.6■□□□□ 0.25
LRRTM4Q86VH4 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC16.6■□□□□ 0.25
LRRTM4Q86VH4 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC16.6■□□□□ 0.25
LRRTM4Q86VH4 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LRRTM4Q86VH4 MPDU1-223ENST00000582151 728 ntBASIC16.6■□□□□ 0.25
LRRTM4Q86VH4 AC010327.4-202ENST00000591484 748 ntBASIC16.6■□□□□ 0.25
LRRTM4Q86VH4 AC068137.2-201ENST00000605408 478 ntBASIC16.6■□□□□ 0.25
LRRTM4Q86VH4 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC16.6■□□□□ 0.25
LRRTM4Q86VH4 AP001350.2-201ENST00000625104 1094 ntBASIC16.6■□□□□ 0.25
LRRTM4Q86VH4 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
LRRTM4Q86VH4 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRRTM4Q86VH4 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LRRTM4Q86VH4 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LRRTM4Q86VH4 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
LRRTM4Q86VH4 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC16.6■□□□□ 0.25
LRRTM4Q86VH4 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRRTM4Q86VH4 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LRRTM4Q86VH4 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC16.6■□□□□ 0.25
LRRTM4Q86VH4 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LRRTM4Q86VH4 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LRRTM4Q86VH4 AP001094.4-201ENST00000579008 2176 ntBASIC16.6■□□□□ 0.25
LRRTM4Q86VH4 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LRRTM4Q86VH4 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LRRTM4Q86VH4 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LRRTM4Q86VH4 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LRRTM4Q86VH4 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRRTM4Q86VH4 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRRTM4Q86VH4 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
LRRTM4Q86VH4 AC131009.4-201ENST00000624048 1740 ntBASIC16.59■□□□□ 0.25
LRRTM4Q86VH4 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRRTM4Q86VH4 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRRTM4Q86VH4 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRRTM4Q86VH4 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC16.59■□□□□ 0.25
LRRTM4Q86VH4 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRRTM4Q86VH4 AC060834.1-201ENST00000443027 2032 ntBASIC16.59■□□□□ 0.25
LRRTM4Q86VH4 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
LRRTM4Q86VH4 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRRTM4Q86VH4 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LRRTM4Q86VH4 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRRTM4Q86VH4 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC16.59■□□□□ 0.25
LRRTM4Q86VH4 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC16.59■□□□□ 0.25
LRRTM4Q86VH4 UPF3AP3-201ENST00000420996 769 ntBASIC16.59■□□□□ 0.25
LRRTM4Q86VH4 GPX1P2-201ENST00000429271 606 ntBASIC16.59■□□□□ 0.25
LRRTM4Q86VH4 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC16.59■□□□□ 0.25
LRRTM4Q86VH4 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC16.59■□□□□ 0.25
LRRTM4Q86VH4 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC16.59■□□□□ 0.25
LRRTM4Q86VH4 NMU-203ENST00000507338 658 ntTSL 3 BASIC16.59■□□□□ 0.25
LRRTM4Q86VH4 AC087641.1-201ENST00000557561 1021 ntBASIC16.59■□□□□ 0.25
LRRTM4Q86VH4 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC16.59■□□□□ 0.25
LRRTM4Q86VH4 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LRRTM4Q86VH4 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRRTM4Q86VH4 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRRTM4Q86VH4 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRRTM4Q86VH4 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC16.59■□□□□ 0.25
LRRTM4Q86VH4 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRRTM4Q86VH4 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRRTM4Q86VH4 SLC22A20-204ENST00000530038 1673 ntBASIC16.59■□□□□ 0.25
LRRTM4Q86VH4 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC16.59■□□□□ 0.25
LRRTM4Q86VH4 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC16.58■□□□□ 0.25
LRRTM4Q86VH4 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
LRRTM4Q86VH4 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
LRRTM4Q86VH4 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
LRRTM4Q86VH4 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC16.58■□□□□ 0.25
LRRTM4Q86VH4 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.58■□□□□ 0.25
LRRTM4Q86VH4 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.58■□□□□ 0.25
LRRTM4Q86VH4 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
LRRTM4Q86VH4 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.25
LRRTM4Q86VH4 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC16.58■□□□□ 0.24
LRRTM4Q86VH4 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
LRRTM4Q86VH4 RPSAP43-201ENST00000402237 625 ntBASIC16.58■□□□□ 0.24
LRRTM4Q86VH4 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
LRRTM4Q86VH4 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC16.58■□□□□ 0.24
LRRTM4Q86VH4 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LRRTM4Q86VH4 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LRRTM4Q86VH4 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
LRRTM4Q86VH4 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
LRRTM4Q86VH4 HARS-204ENST00000438307 1789 ntTSL 2 BASIC16.58■□□□□ 0.24
LRRTM4Q86VH4 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
LRRTM4Q86VH4 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
LRRTM4Q86VH4 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LRRTM4Q86VH4 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LRRTM4Q86VH4 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
LRRTM4Q86VH4 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
LRRTM4Q86VH4 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms