Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
MRPL55Q7Z7F7 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
MRPL55Q7Z7F7 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
MRPL55Q7Z7F7 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC10.96□□□□□ -0.65
MRPL55Q7Z7F7 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
MRPL55Q7Z7F7 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
MRPL55Q7Z7F7 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
MRPL55Q7Z7F7 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
MRPL55Q7Z7F7 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC10.96□□□□□ -0.65
MRPL55Q7Z7F7 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC10.96□□□□□ -0.65
MRPL55Q7Z7F7 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
MRPL55Q7Z7F7 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
MRPL55Q7Z7F7 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
MRPL55Q7Z7F7 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC10.96□□□□□ -0.65
MRPL55Q7Z7F7 FXN-203ENST00000396366 922 ntTSL 2 BASIC10.96□□□□□ -0.65
MRPL55Q7Z7F7 CTNS-203ENST00000399306 803 ntTSL 3 BASIC10.96□□□□□ -0.65
MRPL55Q7Z7F7 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC10.96□□□□□ -0.65
MRPL55Q7Z7F7 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
MRPL55Q7Z7F7 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC10.96□□□□□ -0.65
MRPL55Q7Z7F7 TSSC2-201ENST00000450217 709 ntBASIC10.96□□□□□ -0.65
MRPL55Q7Z7F7 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC10.96□□□□□ -0.65
MRPL55Q7Z7F7 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC10.96□□□□□ -0.65
MRPL55Q7Z7F7 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC10.96□□□□□ -0.65
MRPL55Q7Z7F7 AC087388.1-201ENST00000571370 1112 ntBASIC10.96□□□□□ -0.65
MRPL55Q7Z7F7 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
MRPL55Q7Z7F7 AC011467.2-201ENST00000598425 242 ntBASIC10.96□□□□□ -0.65
MRPL55Q7Z7F7 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC10.96□□□□□ -0.65
MRPL55Q7Z7F7 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
MRPL55Q7Z7F7 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
MRPL55Q7Z7F7 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC10.96□□□□□ -0.66
MRPL55Q7Z7F7 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
MRPL55Q7Z7F7 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
MRPL55Q7Z7F7 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
MRPL55Q7Z7F7 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
MRPL55Q7Z7F7 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
MRPL55Q7Z7F7 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC10.96□□□□□ -0.66
MRPL55Q7Z7F7 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
MRPL55Q7Z7F7 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.66
MRPL55Q7Z7F7 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
MRPL55Q7Z7F7 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
MRPL55Q7Z7F7 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC10.96□□□□□ -0.66
MRPL55Q7Z7F7 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
MRPL55Q7Z7F7 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
MRPL55Q7Z7F7 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC10.96□□□□□ -0.66
MRPL55Q7Z7F7 AC005915.1-201ENST00000624912 2018 ntBASIC10.96□□□□□ -0.66
MRPL55Q7Z7F7 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC10.96□□□□□ -0.66
MRPL55Q7Z7F7 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
MRPL55Q7Z7F7 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
MRPL55Q7Z7F7 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
MRPL55Q7Z7F7 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
MRPL55Q7Z7F7 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
MRPL55Q7Z7F7 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
MRPL55Q7Z7F7 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
MRPL55Q7Z7F7 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
MRPL55Q7Z7F7 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC10.95□□□□□ -0.66
MRPL55Q7Z7F7 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
MRPL55Q7Z7F7 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
MRPL55Q7Z7F7 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
MRPL55Q7Z7F7 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
MRPL55Q7Z7F7 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
MRPL55Q7Z7F7 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
MRPL55Q7Z7F7 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
MRPL55Q7Z7F7 TP73-AS1-210ENST00000637775 1455 ntBASIC10.95□□□□□ -0.66
MRPL55Q7Z7F7 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
MRPL55Q7Z7F7 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
MRPL55Q7Z7F7 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC10.95□□□□□ -0.66
MRPL55Q7Z7F7 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC10.95□□□□□ -0.66
MRPL55Q7Z7F7 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC10.95□□□□□ -0.66
MRPL55Q7Z7F7 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
MRPL55Q7Z7F7 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC10.95□□□□□ -0.66
MRPL55Q7Z7F7 AC016734.2-201ENST00000624325 1377 ntBASIC10.95□□□□□ -0.66
MRPL55Q7Z7F7 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
MRPL55Q7Z7F7 AC105020.1-201ENST00000435356 2205 ntBASIC10.95□□□□□ -0.66
MRPL55Q7Z7F7 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
MRPL55Q7Z7F7 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
MRPL55Q7Z7F7 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
MRPL55Q7Z7F7 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
MRPL55Q7Z7F7 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC10.95□□□□□ -0.66
MRPL55Q7Z7F7 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC10.95□□□□□ -0.66
MRPL55Q7Z7F7 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC10.95□□□□□ -0.66
MRPL55Q7Z7F7 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
MRPL55Q7Z7F7 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC10.95□□□□□ -0.66
MRPL55Q7Z7F7 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
MRPL55Q7Z7F7 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC10.95□□□□□ -0.66
MRPL55Q7Z7F7 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC10.95□□□□□ -0.66
MRPL55Q7Z7F7 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC10.95□□□□□ -0.66
MRPL55Q7Z7F7 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC10.95□□□□□ -0.66
MRPL55Q7Z7F7 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
MRPL55Q7Z7F7 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC10.95□□□□□ -0.66
MRPL55Q7Z7F7 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC10.95□□□□□ -0.66
MRPL55Q7Z7F7 ARL16-209ENST00000573715 763 ntTSL 3 BASIC10.95□□□□□ -0.66
MRPL55Q7Z7F7 ARL16-211ENST00000576135 694 ntTSL 3 BASIC10.95□□□□□ -0.66
MRPL55Q7Z7F7 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC10.95□□□□□ -0.66
MRPL55Q7Z7F7 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
MRPL55Q7Z7F7 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC10.95□□□□□ -0.66
MRPL55Q7Z7F7 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
MRPL55Q7Z7F7 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC10.95□□□□□ -0.66
MRPL55Q7Z7F7 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
MRPL55Q7Z7F7 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
MRPL55Q7Z7F7 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms