Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC13.94□□□□□ -0.18
VPS13CQ709C8 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
VPS13CQ709C8 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
VPS13CQ709C8 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC13.94□□□□□ -0.18
VPS13CQ709C8 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC13.94□□□□□ -0.18
VPS13CQ709C8 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC13.94□□□□□ -0.18
VPS13CQ709C8 AC007967.4-201ENST00000614700 386 ntBASIC13.94□□□□□ -0.18
VPS13CQ709C8 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC13.94□□□□□ -0.18
VPS13CQ709C8 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
VPS13CQ709C8 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC13.93□□□□□ -0.18
VPS13CQ709C8 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
VPS13CQ709C8 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC13.93□□□□□ -0.18
VPS13CQ709C8 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
VPS13CQ709C8 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
VPS13CQ709C8 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
VPS13CQ709C8 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
VPS13CQ709C8 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
VPS13CQ709C8 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC13.93□□□□□ -0.18
VPS13CQ709C8 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC13.93□□□□□ -0.18
VPS13CQ709C8 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
VPS13CQ709C8 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
VPS13CQ709C8 MTRF1LP2-201ENST00000506027 1122 ntBASIC13.93□□□□□ -0.18
VPS13CQ709C8 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC13.93□□□□□ -0.18
VPS13CQ709C8 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC13.93□□□□□ -0.18
VPS13CQ709C8 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
VPS13CQ709C8 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
VPS13CQ709C8 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
VPS13CQ709C8 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC13.93□□□□□ -0.18
VPS13CQ709C8 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
VPS13CQ709C8 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
VPS13CQ709C8 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
VPS13CQ709C8 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC13.93□□□□□ -0.18
VPS13CQ709C8 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
VPS13CQ709C8 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
VPS13CQ709C8 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
VPS13CQ709C8 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
VPS13CQ709C8 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
VPS13CQ709C8 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
VPS13CQ709C8 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC13.93□□□□□ -0.18
VPS13CQ709C8 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
VPS13CQ709C8 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
VPS13CQ709C8 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
VPS13CQ709C8 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
VPS13CQ709C8 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
VPS13CQ709C8 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
VPS13CQ709C8 HLA-V-204ENST00000476601 1289 ntBASIC13.93□□□□□ -0.18
VPS13CQ709C8 PARP8-206ENST00000503665 572 ntTSL 4 BASIC13.93□□□□□ -0.18
VPS13CQ709C8 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
VPS13CQ709C8 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
VPS13CQ709C8 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC13.93□□□□□ -0.18
VPS13CQ709C8 AC008738.7-201ENST00000609744 511 ntBASIC13.93□□□□□ -0.18
VPS13CQ709C8 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
VPS13CQ709C8 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
VPS13CQ709C8 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
VPS13CQ709C8 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
VPS13CQ709C8 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
VPS13CQ709C8 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
VPS13CQ709C8 AC087499.5-201ENST00000452760 1342 ntBASIC13.92□□□□□ -0.18
VPS13CQ709C8 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
VPS13CQ709C8 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
VPS13CQ709C8 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
VPS13CQ709C8 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC13.92□□□□□ -0.18
VPS13CQ709C8 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
VPS13CQ709C8 MXI1-205ENST00000393134 889 ntTSL 2 BASIC13.92□□□□□ -0.18
VPS13CQ709C8 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
VPS13CQ709C8 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC13.92□□□□□ -0.18
VPS13CQ709C8 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC13.92□□□□□ -0.18
VPS13CQ709C8 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC13.92□□□□□ -0.18
VPS13CQ709C8 PRR29-204ENST00000577953 565 ntTSL 4 BASIC13.92□□□□□ -0.18
VPS13CQ709C8 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
VPS13CQ709C8 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC13.92□□□□□ -0.18
VPS13CQ709C8 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
VPS13CQ709C8 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
VPS13CQ709C8 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
VPS13CQ709C8 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
VPS13CQ709C8 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
VPS13CQ709C8 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
VPS13CQ709C8 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
VPS13CQ709C8 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
VPS13CQ709C8 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC13.92□□□□□ -0.18
VPS13CQ709C8 ORC6-206ENST00000568364 888 ntTSL 5 BASIC13.92□□□□□ -0.18
VPS13CQ709C8 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC13.92□□□□□ -0.18
VPS13CQ709C8 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC13.92□□□□□ -0.18
VPS13CQ709C8 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
VPS13CQ709C8 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC13.92□□□□□ -0.18
VPS13CQ709C8 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
VPS13CQ709C8 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC13.92□□□□□ -0.18
VPS13CQ709C8 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
VPS13CQ709C8 ABALON-201ENST00000629058 1903 ntBASIC13.92□□□□□ -0.18
VPS13CQ709C8 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
VPS13CQ709C8 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC13.92□□□□□ -0.18
VPS13CQ709C8 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
VPS13CQ709C8 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
VPS13CQ709C8 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC13.92□□□□□ -0.18
VPS13CQ709C8 STOM-203ENST00000538954 1257 ntTSL 5 BASIC13.92□□□□□ -0.18
VPS13CQ709C8 MCC-208ENST00000514701 2855 ntTSL 2 BASIC13.91□□□□□ -0.18
VPS13CQ709C8 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
VPS13CQ709C8 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
VPS13CQ709C8 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
VPS13CQ709C8 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms