Protein–RNA interactions for Protein: Q6WN34

CHRDL2, Chordin-like protein 2, humanhuman

Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL2Q6WN34 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CHRDL2Q6WN34 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC18.37■□□□□ 0.53
CHRDL2Q6WN34 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CHRDL2Q6WN34 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CHRDL2Q6WN34 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.37■□□□□ 0.53
CHRDL2Q6WN34 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CHRDL2Q6WN34 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
CHRDL2Q6WN34 AL161938.1-201ENST00000569833 2180 ntBASIC18.37■□□□□ 0.53
CHRDL2Q6WN34 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CHRDL2Q6WN34 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.37■□□□□ 0.53
CHRDL2Q6WN34 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC18.37■□□□□ 0.53
CHRDL2Q6WN34 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
CHRDL2Q6WN34 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHRDL2Q6WN34 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CHRDL2Q6WN34 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHRDL2Q6WN34 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHRDL2Q6WN34 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CHRDL2Q6WN34 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHRDL2Q6WN34 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC18.36■□□□□ 0.53
CHRDL2Q6WN34 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC18.36■□□□□ 0.53
CHRDL2Q6WN34 CENPM-206ENST00000407253 818 ntTSL 2 BASIC18.36■□□□□ 0.53
CHRDL2Q6WN34 CASKP1-201ENST00000412870 582 ntBASIC18.36■□□□□ 0.53
CHRDL2Q6WN34 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHRDL2Q6WN34 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC18.36■□□□□ 0.53
CHRDL2Q6WN34 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CHRDL2Q6WN34 RASL12-203ENST00000434605 982 ntTSL 2 BASIC18.36■□□□□ 0.53
CHRDL2Q6WN34 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHRDL2Q6WN34 AL035456.1-201ENST00000456064 1369 ntBASIC18.36■□□□□ 0.53
CHRDL2Q6WN34 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC18.36■□□□□ 0.53
CHRDL2Q6WN34 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC18.36■□□□□ 0.53
CHRDL2Q6WN34 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHRDL2Q6WN34 AC002558.1-201ENST00000488906 803 ntBASIC18.36■□□□□ 0.53
CHRDL2Q6WN34 AC108725.1-201ENST00000495472 409 ntBASIC18.36■□□□□ 0.53
CHRDL2Q6WN34 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CHRDL2Q6WN34 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC18.36■□□□□ 0.53
CHRDL2Q6WN34 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC18.36■□□□□ 0.53
CHRDL2Q6WN34 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CHRDL2Q6WN34 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
CHRDL2Q6WN34 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC18.36■□□□□ 0.53
CHRDL2Q6WN34 CTBP2P3-201ENST00000585629 1255 ntBASIC18.36■□□□□ 0.53
CHRDL2Q6WN34 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
CHRDL2Q6WN34 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC18.36■□□□□ 0.53
CHRDL2Q6WN34 AC090116.1-201ENST00000615679 446 ntBASIC18.36■□□□□ 0.53
CHRDL2Q6WN34 WNT11-204ENST00000621122 789 ntTSL 5 BASIC18.36■□□□□ 0.53
CHRDL2Q6WN34 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC18.36■□□□□ 0.53
CHRDL2Q6WN34 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
CHRDL2Q6WN34 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHRDL2Q6WN34 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CHRDL2Q6WN34 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CHRDL2Q6WN34 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CHRDL2Q6WN34 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC18.35■□□□□ 0.53
CHRDL2Q6WN34 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CHRDL2Q6WN34 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC18.35■□□□□ 0.53
CHRDL2Q6WN34 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CHRDL2Q6WN34 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
CHRDL2Q6WN34 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
CHRDL2Q6WN34 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CHRDL2Q6WN34 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHRDL2Q6WN34 TUBB1P2-201ENST00000422712 1306 ntBASIC18.35■□□□□ 0.53
CHRDL2Q6WN34 TUBB1P1-201ENST00000503144 1300 ntBASIC18.35■□□□□ 0.53
CHRDL2Q6WN34 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC18.35■□□□□ 0.53
CHRDL2Q6WN34 MGST3-202ENST00000367884 716 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
CHRDL2Q6WN34 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC18.35■□□□□ 0.53
CHRDL2Q6WN34 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
CHRDL2Q6WN34 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHRDL2Q6WN34 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CHRDL2Q6WN34 AC142381.1-201ENST00000426099 345 ntBASIC18.35■□□□□ 0.53
CHRDL2Q6WN34 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC18.35■□□□□ 0.53
CHRDL2Q6WN34 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC18.35■□□□□ 0.53
CHRDL2Q6WN34 AC010834.3-201ENST00000520562 939 ntTSL 3 BASIC18.35■□□□□ 0.53
CHRDL2Q6WN34 C11orf65-203ENST00000525729 1263 ntTSL 2 BASIC18.35■□□□□ 0.53
CHRDL2Q6WN34 AP003043.1-201ENST00000527804 547 ntTSL 4 BASIC18.35■□□□□ 0.53
CHRDL2Q6WN34 AC135279.1-201ENST00000543493 504 ntBASIC18.35■□□□□ 0.53
CHRDL2Q6WN34 AC005412.3-201ENST00000580309 715 ntBASIC18.35■□□□□ 0.53
CHRDL2Q6WN34 AC090330.1-201ENST00000588646 764 ntBASIC18.35■□□□□ 0.53
CHRDL2Q6WN34 SMIM8-207ENST00000608525 735 ntTSL 5 BASIC18.35■□□□□ 0.53
CHRDL2Q6WN34 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHRDL2Q6WN34 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CHRDL2Q6WN34 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHRDL2Q6WN34 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHRDL2Q6WN34 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHRDL2Q6WN34 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC18.35■□□□□ 0.53
CHRDL2Q6WN34 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC18.35■□□□□ 0.53
CHRDL2Q6WN34 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.34■□□□□ 0.53
CHRDL2Q6WN34 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHRDL2Q6WN34 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.34■□□□□ 0.53
CHRDL2Q6WN34 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHRDL2Q6WN34 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC18.34■□□□□ 0.53
CHRDL2Q6WN34 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHRDL2Q6WN34 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC18.34■□□□□ 0.53
CHRDL2Q6WN34 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CHRDL2Q6WN34 MTND4P5-201ENST00000435821 1374 ntBASIC18.34■□□□□ 0.53
CHRDL2Q6WN34 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
CHRDL2Q6WN34 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CHRDL2Q6WN34 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHRDL2Q6WN34 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CHRDL2Q6WN34 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CHRDL2Q6WN34 AC055876.2-201ENST00000531834 546 ntBASIC18.34■□□□□ 0.53
CHRDL2Q6WN34 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CHRDL2Q6WN34 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms