Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
USP46P62068 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
USP46P62068 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
USP46P62068 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.81■□□□□ 0.44
USP46P62068 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
USP46P62068 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
USP46P62068 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
USP46P62068 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
USP46P62068 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
USP46P62068 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
USP46P62068 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
USP46P62068 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
USP46P62068 AC092053.1-201ENST00000605787 1936 ntBASIC17.8■□□□□ 0.44
USP46P62068 AC018695.7-201ENST00000624587 2492 ntBASIC17.8■□□□□ 0.44
USP46P62068 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
USP46P62068 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
USP46P62068 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
USP46P62068 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC17.8■□□□□ 0.44
USP46P62068 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC17.8■□□□□ 0.44
USP46P62068 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
USP46P62068 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
USP46P62068 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC17.8■□□□□ 0.44
USP46P62068 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
USP46P62068 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
USP46P62068 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC17.8■□□□□ 0.44
USP46P62068 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC17.8■□□□□ 0.44
USP46P62068 AP006288.1-201ENST00000446065 395 ntBASIC17.8■□□□□ 0.44
USP46P62068 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
USP46P62068 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC17.8■□□□□ 0.44
USP46P62068 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
USP46P62068 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC17.8■□□□□ 0.44
USP46P62068 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC17.8■□□□□ 0.44
USP46P62068 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
USP46P62068 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC17.8■□□□□ 0.44
USP46P62068 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
USP46P62068 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.8■□□□□ 0.44
USP46P62068 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
USP46P62068 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
USP46P62068 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
USP46P62068 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
USP46P62068 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC17.8■□□□□ 0.44
USP46P62068 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC17.8■□□□□ 0.44
USP46P62068 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
USP46P62068 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
USP46P62068 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
USP46P62068 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
USP46P62068 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
USP46P62068 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
USP46P62068 STX3-203ENST00000529177 1571 ntTSL 2 BASIC17.79■□□□□ 0.44
USP46P62068 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
USP46P62068 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
USP46P62068 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
USP46P62068 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
USP46P62068 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
USP46P62068 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17.79■□□□□ 0.44
USP46P62068 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
USP46P62068 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.79■□□□□ 0.44
USP46P62068 RHBDF1P1-201ENST00000427504 1941 ntBASIC17.79■□□□□ 0.44
USP46P62068 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.79■□□□□ 0.44
USP46P62068 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
USP46P62068 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC17.79■□□□□ 0.44
USP46P62068 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC17.79■□□□□ 0.44
USP46P62068 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC17.79■□□□□ 0.44
USP46P62068 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC17.79■□□□□ 0.44
USP46P62068 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
USP46P62068 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC17.79■□□□□ 0.44
USP46P62068 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC17.79■□□□□ 0.44
USP46P62068 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC17.79■□□□□ 0.44
USP46P62068 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC17.79■□□□□ 0.44
USP46P62068 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC17.79■□□□□ 0.44
USP46P62068 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
USP46P62068 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
USP46P62068 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.79■□□□□ 0.44
USP46P62068 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC17.79■□□□□ 0.44
USP46P62068 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC17.79■□□□□ 0.44
USP46P62068 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
USP46P62068 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
USP46P62068 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.79■□□□□ 0.44
USP46P62068 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
USP46P62068 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
USP46P62068 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
USP46P62068 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
USP46P62068 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.79■□□□□ 0.44
USP46P62068 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
USP46P62068 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
USP46P62068 LINC02012-201ENST00000608206 1725 ntBASIC17.78■□□□□ 0.44
USP46P62068 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
USP46P62068 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
USP46P62068 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
USP46P62068 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.78■□□□□ 0.44
USP46P62068 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
USP46P62068 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
USP46P62068 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
USP46P62068 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
USP46P62068 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
USP46P62068 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC17.78■□□□□ 0.44
USP46P62068 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC17.78■□□□□ 0.44
USP46P62068 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
USP46P62068 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
USP46P62068 PUS1-205ENST00000535067 838 ntTSL 3 BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms