Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC17.52■□□□□ 0.39
NEK3P51956 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
NEK3P51956 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
NEK3P51956 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
NEK3P51956 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC17.52■□□□□ 0.39
NEK3P51956 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
NEK3P51956 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
NEK3P51956 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
NEK3P51956 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17.51■□□□□ 0.39
NEK3P51956 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
NEK3P51956 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NEK3P51956 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
NEK3P51956 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC17.51■□□□□ 0.39
NEK3P51956 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
NEK3P51956 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
NEK3P51956 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
NEK3P51956 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
NEK3P51956 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NEK3P51956 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NEK3P51956 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC17.51■□□□□ 0.39
NEK3P51956 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
NEK3P51956 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NEK3P51956 AC136632.2-201ENST00000512891 861 ntBASIC17.51■□□□□ 0.39
NEK3P51956 RNA5SP415-201ENST00000517246 115 ntBASIC17.51■□□□□ 0.39
NEK3P51956 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC17.51■□□□□ 0.39
NEK3P51956 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NEK3P51956 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
NEK3P51956 PIN1-206ENST00000587625 878 ntTSL 2 BASIC17.51■□□□□ 0.39
NEK3P51956 LINC02012-201ENST00000608206 1725 ntBASIC17.51■□□□□ 0.39
NEK3P51956 Z83851.2-201ENST00000609564 659 ntBASIC17.51■□□□□ 0.39
NEK3P51956 AC004706.3-202ENST00000621574 984 ntBASIC17.51■□□□□ 0.39
NEK3P51956 AC005593.1-201ENST00000624894 515 ntBASIC17.51■□□□□ 0.39
NEK3P51956 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.51■□□□□ 0.39
NEK3P51956 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.51■□□□□ 0.39
NEK3P51956 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
NEK3P51956 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NEK3P51956 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
NEK3P51956 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
NEK3P51956 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC17.51■□□□□ 0.39
NEK3P51956 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC17.51■□□□□ 0.39
NEK3P51956 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NEK3P51956 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NEK3P51956 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NEK3P51956 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC17.5■□□□□ 0.39
NEK3P51956 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NEK3P51956 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NEK3P51956 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NEK3P51956 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
NEK3P51956 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC17.5■□□□□ 0.39
NEK3P51956 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC17.5■□□□□ 0.39
NEK3P51956 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NEK3P51956 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NEK3P51956 AC073621.1-201ENST00000392730 636 ntBASIC17.5■□□□□ 0.39
NEK3P51956 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NEK3P51956 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NEK3P51956 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
NEK3P51956 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC17.5■□□□□ 0.39
NEK3P51956 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC17.5■□□□□ 0.39
NEK3P51956 AL139327.4-201ENST00000612362 153 ntBASIC17.5■□□□□ 0.39
NEK3P51956 CAND2-206ENST00000626378 333 ntTSL 5 BASIC17.5■□□□□ 0.39
NEK3P51956 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC17.5■□□□□ 0.39
NEK3P51956 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC17.5■□□□□ 0.39
NEK3P51956 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NEK3P51956 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NEK3P51956 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC17.5■□□□□ 0.39
NEK3P51956 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
NEK3P51956 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
NEK3P51956 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
NEK3P51956 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NEK3P51956 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NEK3P51956 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NEK3P51956 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC17.5■□□□□ 0.39
NEK3P51956 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
NEK3P51956 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
NEK3P51956 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NEK3P51956 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
NEK3P51956 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
NEK3P51956 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NEK3P51956 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NEK3P51956 DOC2GP-204ENST00000639052 2548 ntBASIC17.49■□□□□ 0.39
NEK3P51956 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
NEK3P51956 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NEK3P51956 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NEK3P51956 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
NEK3P51956 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC17.49■□□□□ 0.39
NEK3P51956 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NEK3P51956 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NEK3P51956 ELK2BP-201ENST00000415014 1224 ntBASIC17.49■□□□□ 0.39
NEK3P51956 ARTN-206ENST00000472435 402 ntTSL 3 BASIC17.49■□□□□ 0.39
NEK3P51956 UNC93B6-202ENST00000528242 690 ntBASIC17.49■□□□□ 0.39
NEK3P51956 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC17.49■□□□□ 0.39
NEK3P51956 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
NEK3P51956 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC17.49■□□□□ 0.39
NEK3P51956 AL139424.1-201ENST00000607572 797 ntBASIC17.49■□□□□ 0.39
NEK3P51956 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC17.49■□□□□ 0.39
NEK3P51956 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC17.49■□□□□ 0.39
NEK3P51956 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NEK3P51956 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
NEK3P51956 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NEK3P51956 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms