Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
LHX1P48742 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LHX1P48742 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC17.89■□□□□ 0.45
LHX1P48742 RNU1-129P-201ENST00000384064 167 ntBASIC17.89■□□□□ 0.45
LHX1P48742 AC254562.1-201ENST00000417586 456 ntBASIC17.89■□□□□ 0.45
LHX1P48742 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC17.89■□□□□ 0.45
LHX1P48742 STARD13-205ENST00000439831 945 ntTSL 2 BASIC17.89■□□□□ 0.45
LHX1P48742 PUS1-205ENST00000535067 838 ntTSL 3 BASIC17.89■□□□□ 0.45
LHX1P48742 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC17.89■□□□□ 0.45
LHX1P48742 U1.21-201ENST00000580816 167 ntBASIC17.89■□□□□ 0.45
LHX1P48742 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC17.89■□□□□ 0.45
LHX1P48742 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LHX1P48742 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
LHX1P48742 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
LHX1P48742 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.89■□□□□ 0.45
LHX1P48742 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.89■□□□□ 0.45
LHX1P48742 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC17.89■□□□□ 0.45
LHX1P48742 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
LHX1P48742 FZD10-202ENST00000539839 3282 ntBASIC17.89■□□□□ 0.45
LHX1P48742 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LHX1P48742 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
LHX1P48742 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LHX1P48742 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LHX1P48742 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
LHX1P48742 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LHX1P48742 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LHX1P48742 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
LHX1P48742 AC006277.1-201ENST00000624348 1610 ntBASIC17.88■□□□□ 0.45
LHX1P48742 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
LHX1P48742 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LHX1P48742 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC17.88■□□□□ 0.45
LHX1P48742 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LHX1P48742 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC17.88■□□□□ 0.45
LHX1P48742 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LHX1P48742 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LHX1P48742 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
LHX1P48742 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC17.88■□□□□ 0.45
LHX1P48742 CDK2AP2P3-201ENST00000422476 372 ntBASIC17.88■□□□□ 0.45
LHX1P48742 RPS8P6-201ENST00000426177 609 ntBASIC17.88■□□□□ 0.45
LHX1P48742 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
LHX1P48742 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
LHX1P48742 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC17.88■□□□□ 0.45
LHX1P48742 FAM86C2P-203ENST00000528684 1004 ntBASIC17.88■□□□□ 0.45
LHX1P48742 AL031055.1-201ENST00000606362 631 ntBASIC17.88■□□□□ 0.45
LHX1P48742 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
LHX1P48742 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC17.88■□□□□ 0.45
LHX1P48742 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC17.88■□□□□ 0.45
LHX1P48742 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC17.88■□□□□ 0.45
LHX1P48742 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
LHX1P48742 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LHX1P48742 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LHX1P48742 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LHX1P48742 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
LHX1P48742 LINC00895-201ENST00000629028 1637 ntBASIC17.87■□□□□ 0.45
LHX1P48742 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LHX1P48742 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LHX1P48742 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC17.87■□□□□ 0.45
LHX1P48742 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.87■□□□□ 0.45
LHX1P48742 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.87■□□□□ 0.45
LHX1P48742 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
LHX1P48742 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
LHX1P48742 AC092474.2-201ENST00000424288 719 ntBASIC17.87■□□□□ 0.45
LHX1P48742 AL671277.1-201ENST00000429656 993 ntBASIC17.87■□□□□ 0.45
LHX1P48742 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
LHX1P48742 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
LHX1P48742 DNAJB3-202ENST00000449667 1266 ntBASIC17.87■□□□□ 0.45
LHX1P48742 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
LHX1P48742 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC17.87■□□□□ 0.45
LHX1P48742 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
LHX1P48742 IGHV3OR16-6-201ENST00000568775 360 ntBASIC17.87■□□□□ 0.45
LHX1P48742 AP001160.2-201ENST00000596071 487 ntBASIC17.87■□□□□ 0.45
LHX1P48742 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC17.87■□□□□ 0.45
LHX1P48742 AC099522.2-201ENST00000607001 744 ntBASIC17.87■□□□□ 0.45
LHX1P48742 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC17.87■□□□□ 0.45
LHX1P48742 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LHX1P48742 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
LHX1P48742 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LHX1P48742 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
LHX1P48742 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
LHX1P48742 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
LHX1P48742 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
LHX1P48742 AP001094.4-201ENST00000579008 2176 ntBASIC17.87■□□□□ 0.45
LHX1P48742 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
LHX1P48742 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LHX1P48742 PCDHB17P-201ENST00000539533 2393 ntBASIC17.87■□□□□ 0.45
LHX1P48742 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LHX1P48742 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC17.87■□□□□ 0.45
LHX1P48742 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
LHX1P48742 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC17.86■□□□□ 0.45
LHX1P48742 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
LHX1P48742 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
LHX1P48742 AC060834.1-201ENST00000443027 2032 ntBASIC17.86■□□□□ 0.45
LHX1P48742 SLC9A3P2-201ENST00000447821 2021 ntBASIC17.86■□□□□ 0.45
LHX1P48742 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
LHX1P48742 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
LHX1P48742 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC17.86■□□□□ 0.45
LHX1P48742 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC17.86■□□□□ 0.45
LHX1P48742 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC17.86■□□□□ 0.45
LHX1P48742 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC17.86■□□□□ 0.45
LHX1P48742 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms