Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
TNFSF4P23510 PRSS29P-201ENST00000440800 595 ntBASIC14.52□□□□□ -0.09
TNFSF4P23510 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC14.52□□□□□ -0.09
TNFSF4P23510 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC14.52□□□□□ -0.09
TNFSF4P23510 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC14.52□□□□□ -0.09
TNFSF4P23510 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC14.52□□□□□ -0.09
TNFSF4P23510 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC14.52□□□□□ -0.09
TNFSF4P23510 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TNFSF4P23510 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC14.52□□□□□ -0.09
TNFSF4P23510 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TNFSF4P23510 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
TNFSF4P23510 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC14.52□□□□□ -0.09
TNFSF4P23510 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TNFSF4P23510 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
TNFSF4P23510 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TNFSF4P23510 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TNFSF4P23510 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC14.52□□□□□ -0.09
TNFSF4P23510 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TNFSF4P23510 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TNFSF4P23510 LINC02012-201ENST00000608206 1725 ntBASIC14.52□□□□□ -0.09
TNFSF4P23510 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TNFSF4P23510 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
TNFSF4P23510 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
TNFSF4P23510 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TNFSF4P23510 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC14.51□□□□□ -0.09
TNFSF4P23510 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TNFSF4P23510 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
TNFSF4P23510 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TNFSF4P23510 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC14.51□□□□□ -0.09
TNFSF4P23510 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
TNFSF4P23510 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
TNFSF4P23510 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
TNFSF4P23510 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
TNFSF4P23510 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TNFSF4P23510 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
TNFSF4P23510 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC14.51□□□□□ -0.09
TNFSF4P23510 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
TNFSF4P23510 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
TNFSF4P23510 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
TNFSF4P23510 BEX3-201ENST00000361298 921 ntTSL 2 BASIC14.51□□□□□ -0.09
TNFSF4P23510 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TNFSF4P23510 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC14.51□□□□□ -0.09
TNFSF4P23510 AL591424.1-201ENST00000442569 1213 ntBASIC14.51□□□□□ -0.09
TNFSF4P23510 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC14.51□□□□□ -0.09
TNFSF4P23510 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
TNFSF4P23510 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC14.51□□□□□ -0.09
TNFSF4P23510 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC14.51□□□□□ -0.09
TNFSF4P23510 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC14.51□□□□□ -0.09
TNFSF4P23510 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
TNFSF4P23510 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC14.51□□□□□ -0.09
TNFSF4P23510 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC14.51□□□□□ -0.09
TNFSF4P23510 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC14.51□□□□□ -0.09
TNFSF4P23510 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC14.51□□□□□ -0.09
TNFSF4P23510 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC14.51□□□□□ -0.09
TNFSF4P23510 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TNFSF4P23510 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
TNFSF4P23510 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TNFSF4P23510 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TNFSF4P23510 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TNFSF4P23510 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC14.51□□□□□ -0.09
TNFSF4P23510 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TNFSF4P23510 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TNFSF4P23510 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TNFSF4P23510 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TNFSF4P23510 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC14.51□□□□□ -0.09
TNFSF4P23510 AC141586.5-201ENST00000624546 2050 ntBASIC14.51□□□□□ -0.09
TNFSF4P23510 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC14.51□□□□□ -0.09
TNFSF4P23510 AC068587.6-202ENST00000641839 5619 ntBASIC14.51□□□□□ -0.09
TNFSF4P23510 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TNFSF4P23510 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
TNFSF4P23510 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TNFSF4P23510 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
TNFSF4P23510 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TNFSF4P23510 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TNFSF4P23510 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TNFSF4P23510 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC14.5□□□□□ -0.09
TNFSF4P23510 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TNFSF4P23510 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TNFSF4P23510 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC14.5□□□□□ -0.09
TNFSF4P23510 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC14.5□□□□□ -0.09
TNFSF4P23510 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC14.5□□□□□ -0.09
TNFSF4P23510 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TNFSF4P23510 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TNFSF4P23510 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TNFSF4P23510 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
TNFSF4P23510 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TNFSF4P23510 AC129492.6-201ENST00000611383 1305 ntBASIC14.5□□□□□ -0.09
TNFSF4P23510 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TNFSF4P23510 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TNFSF4P23510 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC14.5□□□□□ -0.09
TNFSF4P23510 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC14.5□□□□□ -0.09
TNFSF4P23510 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TNFSF4P23510 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TNFSF4P23510 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
TNFSF4P23510 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TNFSF4P23510 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TNFSF4P23510 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TNFSF4P23510 AC009947.1-201ENST00000444350 727 ntBASIC14.5□□□□□ -0.09
TNFSF4P23510 PAWRP1-201ENST00000451083 565 ntBASIC14.5□□□□□ -0.09
TNFSF4P23510 AC124947.2-201ENST00000547118 1133 ntBASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms