Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SFTPBP07988 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
SFTPBP07988 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
SFTPBP07988 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SFTPBP07988 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SFTPBP07988 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
SFTPBP07988 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SFTPBP07988 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SFTPBP07988 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
SFTPBP07988 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
SFTPBP07988 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC14.8□□□□□ -0.04
SFTPBP07988 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SFTPBP07988 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SFTPBP07988 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SFTPBP07988 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC14.8□□□□□ -0.04
SFTPBP07988 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
SFTPBP07988 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC14.8□□□□□ -0.04
SFTPBP07988 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC14.8□□□□□ -0.04
SFTPBP07988 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
SFTPBP07988 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC14.8□□□□□ -0.04
SFTPBP07988 AC122714.2-201ENST00000502787 707 ntBASIC14.8□□□□□ -0.04
SFTPBP07988 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC14.8□□□□□ -0.04
SFTPBP07988 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SFTPBP07988 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC14.8□□□□□ -0.04
SFTPBP07988 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC14.8□□□□□ -0.04
SFTPBP07988 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SFTPBP07988 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC14.8□□□□□ -0.04
SFTPBP07988 AL691432.3-201ENST00000621860 400 ntBASIC14.8□□□□□ -0.04
SFTPBP07988 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC14.8□□□□□ -0.04
SFTPBP07988 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SFTPBP07988 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
SFTPBP07988 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SFTPBP07988 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SFTPBP07988 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC14.8□□□□□ -0.04
SFTPBP07988 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC14.8□□□□□ -0.04
SFTPBP07988 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SFTPBP07988 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC14.8□□□□□ -0.04
SFTPBP07988 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC14.8□□□□□ -0.04
SFTPBP07988 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SFTPBP07988 LINC02012-201ENST00000608206 1725 ntBASIC14.8□□□□□ -0.04
SFTPBP07988 NORAD-201ENST00000565493 5339 ntBASIC14.8□□□□□ -0.04
SFTPBP07988 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
SFTPBP07988 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SFTPBP07988 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
SFTPBP07988 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SFTPBP07988 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
SFTPBP07988 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SFTPBP07988 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SFTPBP07988 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SFTPBP07988 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SFTPBP07988 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SFTPBP07988 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC14.79□□□□□ -0.04
SFTPBP07988 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SFTPBP07988 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
SFTPBP07988 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
SFTPBP07988 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SFTPBP07988 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC14.79□□□□□ -0.04
SFTPBP07988 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SFTPBP07988 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SFTPBP07988 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SFTPBP07988 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SFTPBP07988 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SFTPBP07988 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
SFTPBP07988 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC14.79□□□□□ -0.04
SFTPBP07988 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SFTPBP07988 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SFTPBP07988 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC14.79□□□□□ -0.04
SFTPBP07988 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SFTPBP07988 NSUN5P1-202ENST00000421140 1535 ntBASIC14.79□□□□□ -0.04
SFTPBP07988 CA12-203ENST00000422263 2556 ntTSL 2 BASIC14.79□□□□□ -0.04
SFTPBP07988 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
SFTPBP07988 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC14.79□□□□□ -0.04
SFTPBP07988 MINOS1P3-201ENST00000457048 203 ntBASIC14.79□□□□□ -0.04
SFTPBP07988 NSUN5P2-203ENST00000457352 1529 ntBASIC14.79□□□□□ -0.04
SFTPBP07988 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SFTPBP07988 UNC93B7-201ENST00000509439 705 ntBASIC14.79□□□□□ -0.04
SFTPBP07988 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
SFTPBP07988 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC14.79□□□□□ -0.04
SFTPBP07988 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
SFTPBP07988 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
SFTPBP07988 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
SFTPBP07988 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
SFTPBP07988 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
SFTPBP07988 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC14.79□□□□□ -0.04
SFTPBP07988 AC092053.1-201ENST00000605787 1936 ntBASIC14.79□□□□□ -0.04
SFTPBP07988 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC14.79□□□□□ -0.04
SFTPBP07988 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
SFTPBP07988 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
SFTPBP07988 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SFTPBP07988 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SFTPBP07988 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
SFTPBP07988 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SFTPBP07988 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC14.79□□□□□ -0.04
SFTPBP07988 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC14.78□□□□□ -0.04
SFTPBP07988 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SFTPBP07988 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SFTPBP07988 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
SFTPBP07988 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC14.78□□□□□ -0.04
SFTPBP07988 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
SFTPBP07988 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms