Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PFDN1O60925 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PFDN1O60925 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC15.14■□□□□ 0.01
PFDN1O60925 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PFDN1O60925 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC15.14■□□□□ 0.01
PFDN1O60925 AC105020.6-201ENST00000621523 1217 ntBASIC15.14■□□□□ 0.01
PFDN1O60925 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC15.14■□□□□ 0.01
PFDN1O60925 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
PFDN1O60925 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PFDN1O60925 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC15.14■□□□□ 0.01
PFDN1O60925 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PFDN1O60925 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PFDN1O60925 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
PFDN1O60925 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PFDN1O60925 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PFDN1O60925 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PFDN1O60925 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
PFDN1O60925 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
PFDN1O60925 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PFDN1O60925 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PFDN1O60925 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC15.14■□□□□ 0.01
PFDN1O60925 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC15.14■□□□□ 0.01
PFDN1O60925 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PFDN1O60925 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PFDN1O60925 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
PFDN1O60925 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC15.14■□□□□ 0.01
PFDN1O60925 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
PFDN1O60925 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC15.14■□□□□ 0.01
PFDN1O60925 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PFDN1O60925 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PFDN1O60925 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
PFDN1O60925 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
PFDN1O60925 AL356585.2-201ENST00000625078 2396 ntBASIC15.13■□□□□ 0.01
PFDN1O60925 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC15.13■□□□□ 0.01
PFDN1O60925 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PFDN1O60925 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PFDN1O60925 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PFDN1O60925 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PFDN1O60925 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
PFDN1O60925 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
PFDN1O60925 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PFDN1O60925 CICP23-201ENST00000605013 2741 ntBASIC15.13■□□□□ 0.01
PFDN1O60925 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
PFDN1O60925 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PFDN1O60925 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PFDN1O60925 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PFDN1O60925 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PFDN1O60925 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PFDN1O60925 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
PFDN1O60925 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PFDN1O60925 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PFDN1O60925 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PFDN1O60925 SRP19-202ENST00000445150 833 ntTSL 2 BASIC15.13■□□□□ 0.01
PFDN1O60925 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PFDN1O60925 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC15.13■□□□□ 0.01
PFDN1O60925 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC15.13■□□□□ 0.01
PFDN1O60925 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PFDN1O60925 BRWD1-AS2-201ENST00000603064 1028 ntBASIC15.13■□□□□ 0.01
PFDN1O60925 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PFDN1O60925 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
PFDN1O60925 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PFDN1O60925 AC118758.2-201ENST00000614242 2813 ntBASIC15.13■□□□□ 0.01
PFDN1O60925 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
PFDN1O60925 WARS-232ENST00000556645 2508 ntTSL 5 BASIC15.13■□□□□ 0.01
PFDN1O60925 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PFDN1O60925 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PFDN1O60925 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PFDN1O60925 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC15.13■□□□□ 0.01
PFDN1O60925 USP19-202ENST00000398888 4559 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
PFDN1O60925 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PFDN1O60925 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PFDN1O60925 HTR7P1-201ENST00000538670 1336 ntBASIC15.13■□□□□ 0.01
PFDN1O60925 AC019069.1-201ENST00000610008 1333 ntBASIC15.13■□□□□ 0.01
PFDN1O60925 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
PFDN1O60925 SUPT20HL2-201ENST00000486479 2409 ntBASIC15.13■□□□□ 0.01
PFDN1O60925 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
PFDN1O60925 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PFDN1O60925 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC15.13■□□□□ 0.01
PFDN1O60925 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PFDN1O60925 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PFDN1O60925 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
PFDN1O60925 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
PFDN1O60925 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
PFDN1O60925 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
PFDN1O60925 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PFDN1O60925 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
PFDN1O60925 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PFDN1O60925 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
PFDN1O60925 UROS-202ENST00000368778 1556 ntTSL 2 BASIC15.12■□□□□ 0.01
PFDN1O60925 AC232323.1-201ENST00000540724 2099 ntBASIC15.12■□□□□ 0.01
PFDN1O60925 REXO1L5P-201ENST00000622260 2098 ntBASIC15.12■□□□□ 0.01
PFDN1O60925 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PFDN1O60925 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC15.12■□□□□ 0.01
PFDN1O60925 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC15.12■□□□□ 0.01
PFDN1O60925 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
PFDN1O60925 IRS3P-201ENST00000223076 1006 ntBASIC15.12■□□□□ 0.01
PFDN1O60925 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PFDN1O60925 MTURN-203ENST00000409688 843 ntTSL 2 BASIC15.12■□□□□ 0.01
PFDN1O60925 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC15.12■□□□□ 0.01
PFDN1O60925 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms