Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
HCN1O60741 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC15.91■□□□□ 0.14
HCN1O60741 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC15.91■□□□□ 0.14
HCN1O60741 PAM16-208ENST00000573553 722 ntTSL 2 BASIC15.91■□□□□ 0.14
HCN1O60741 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC15.91■□□□□ 0.14
HCN1O60741 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
HCN1O60741 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC15.91■□□□□ 0.14
HCN1O60741 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC15.91■□□□□ 0.14
HCN1O60741 NME4-212ENST00000621774 904 ntTSL 3 BASIC15.91■□□□□ 0.14
HCN1O60741 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
HCN1O60741 AC107918.4-202ENST00000641623 219 ntBASIC15.91■□□□□ 0.14
HCN1O60741 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HCN1O60741 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HCN1O60741 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
HCN1O60741 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
HCN1O60741 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC15.91■□□□□ 0.14
HCN1O60741 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC15.91■□□□□ 0.14
HCN1O60741 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
HCN1O60741 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
HCN1O60741 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
HCN1O60741 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HCN1O60741 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HCN1O60741 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HCN1O60741 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC15.91■□□□□ 0.14
HCN1O60741 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
HCN1O60741 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC15.91■□□□□ 0.14
HCN1O60741 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
HCN1O60741 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
HCN1O60741 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HCN1O60741 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HCN1O60741 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
HCN1O60741 AL353593.2-201ENST00000602529 1483 ntBASIC15.91■□□□□ 0.14
HCN1O60741 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HCN1O60741 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HCN1O60741 PC-208ENST00000529047 1607 ntTSL 3 BASIC15.9■□□□□ 0.14
HCN1O60741 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
HCN1O60741 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HCN1O60741 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HCN1O60741 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HCN1O60741 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HCN1O60741 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC15.9■□□□□ 0.14
HCN1O60741 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
HCN1O60741 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HCN1O60741 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HCN1O60741 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
HCN1O60741 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
HCN1O60741 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC15.9■□□□□ 0.14
HCN1O60741 SPDYE21P-201ENST00000413323 827 ntBASIC15.9■□□□□ 0.14
HCN1O60741 LAGE3P1-201ENST00000425356 484 ntBASIC15.9■□□□□ 0.14
HCN1O60741 PMS2P1-201ENST00000431037 1228 ntBASIC15.9■□□□□ 0.14
HCN1O60741 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC15.9■□□□□ 0.14
HCN1O60741 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC15.9■□□□□ 0.14
HCN1O60741 CALM1-205ENST00000553542 877 ntTSL 5 BASIC15.9■□□□□ 0.14
HCN1O60741 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC15.9■□□□□ 0.14
HCN1O60741 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC15.9■□□□□ 0.14
HCN1O60741 AL049840.3-201ENST00000602669 611 ntBASIC15.9■□□□□ 0.14
HCN1O60741 AC008735.5-201ENST00000623544 497 ntBASIC15.9■□□□□ 0.14
HCN1O60741 AC116407.3-201ENST00000623905 1129 ntBASIC15.9■□□□□ 0.14
HCN1O60741 AC073592.5-201ENST00000624854 528 ntBASIC15.9■□□□□ 0.14
HCN1O60741 AF228730.7-201ENST00000641842 219 ntBASIC15.9■□□□□ 0.14
HCN1O60741 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC15.9■□□□□ 0.14
HCN1O60741 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC15.9■□□□□ 0.14
HCN1O60741 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HCN1O60741 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
HCN1O60741 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
HCN1O60741 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC15.9■□□□□ 0.14
HCN1O60741 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC15.9■□□□□ 0.14
HCN1O60741 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC15.9■□□□□ 0.14
HCN1O60741 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HCN1O60741 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HCN1O60741 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HCN1O60741 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HCN1O60741 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HCN1O60741 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC15.9■□□□□ 0.14
HCN1O60741 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HCN1O60741 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
HCN1O60741 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HCN1O60741 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HCN1O60741 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HCN1O60741 AC116353.5-201ENST00000638148 1699 ntBASIC15.89■□□□□ 0.13
HCN1O60741 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
HCN1O60741 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
HCN1O60741 PKD1P5-201ENST00000532415 10291 ntBASIC15.89■□□□□ 0.13
HCN1O60741 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HCN1O60741 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HCN1O60741 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC15.89■□□□□ 0.13
HCN1O60741 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC15.89■□□□□ 0.13
HCN1O60741 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HCN1O60741 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HCN1O60741 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC15.89■□□□□ 0.13
HCN1O60741 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC15.89■□□□□ 0.13
HCN1O60741 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
HCN1O60741 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
HCN1O60741 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HCN1O60741 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC15.89■□□□□ 0.13
HCN1O60741 NKTR-203ENST00000442970 646 ntTSL 2 BASIC15.89■□□□□ 0.13
HCN1O60741 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC15.89■□□□□ 0.13
HCN1O60741 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC15.89■□□□□ 0.13
HCN1O60741 RNF151-202ENST00000569210 853 ntTSL 2 BASIC15.89■□□□□ 0.13
HCN1O60741 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms