Protein–RNA interactions for Protein: O43924

PDE6D, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, humanhuman

Predictions only

Length 150 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6DO43924 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC13.19□□□□□ -0.3
PDE6DO43924 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
PDE6DO43924 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC13.19□□□□□ -0.3
PDE6DO43924 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC13.19□□□□□ -0.3
PDE6DO43924 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
PDE6DO43924 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
PDE6DO43924 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC13.19□□□□□ -0.3
PDE6DO43924 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC13.19□□□□□ -0.3
PDE6DO43924 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC13.19□□□□□ -0.3
PDE6DO43924 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
PDE6DO43924 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
PDE6DO43924 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
PDE6DO43924 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
PDE6DO43924 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
PDE6DO43924 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
PDE6DO43924 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC13.19□□□□□ -0.3
PDE6DO43924 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
PDE6DO43924 AMT-206ENST00000458307 1860 ntTSL 2 BASIC13.19□□□□□ -0.3
PDE6DO43924 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
PDE6DO43924 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC13.18□□□□□ -0.3
PDE6DO43924 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
PDE6DO43924 SLC9A7P1-201ENST00000554295 3311 ntBASIC13.18□□□□□ -0.3
PDE6DO43924 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
PDE6DO43924 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC13.18□□□□□ -0.3
PDE6DO43924 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
PDE6DO43924 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
PDE6DO43924 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
PDE6DO43924 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
PDE6DO43924 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
PDE6DO43924 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
PDE6DO43924 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
PDE6DO43924 ENSA-206ENST00000361631 725 ntTSL 2 BASIC13.18□□□□□ -0.3
PDE6DO43924 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC13.18□□□□□ -0.3
PDE6DO43924 HES2-202ENST00000377836 507 ntTSL 2 BASIC13.18□□□□□ -0.3
PDE6DO43924 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
PDE6DO43924 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC13.18□□□□□ -0.3
PDE6DO43924 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC13.18□□□□□ -0.3
PDE6DO43924 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC13.18□□□□□ -0.3
PDE6DO43924 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC13.18□□□□□ -0.3
PDE6DO43924 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC13.18□□□□□ -0.3
PDE6DO43924 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
PDE6DO43924 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
PDE6DO43924 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC13.18□□□□□ -0.3
PDE6DO43924 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
PDE6DO43924 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
PDE6DO43924 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
PDE6DO43924 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
PDE6DO43924 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
PDE6DO43924 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
PDE6DO43924 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
PDE6DO43924 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
PDE6DO43924 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
PDE6DO43924 ING5-213ENST00000636051 4199 ntTSL 5 BASIC13.18□□□□□ -0.3
PDE6DO43924 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
PDE6DO43924 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
PDE6DO43924 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
PDE6DO43924 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
PDE6DO43924 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
PDE6DO43924 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
PDE6DO43924 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
PDE6DO43924 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
PDE6DO43924 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
PDE6DO43924 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
PDE6DO43924 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PDE6DO43924 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC13.17□□□□□ -0.3
PDE6DO43924 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
PDE6DO43924 SRI-203ENST00000419179 1307 ntTSL 2 BASIC13.17□□□□□ -0.3
PDE6DO43924 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
PDE6DO43924 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
PDE6DO43924 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PDE6DO43924 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC13.17□□□□□ -0.3
PDE6DO43924 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC13.17□□□□□ -0.3
PDE6DO43924 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC13.17□□□□□ -0.3
PDE6DO43924 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
PDE6DO43924 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
PDE6DO43924 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PDE6DO43924 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PDE6DO43924 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
PDE6DO43924 AC096633.1-201ENST00000422446 749 ntBASIC13.17□□□□□ -0.3
PDE6DO43924 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
PDE6DO43924 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC13.17□□□□□ -0.3
PDE6DO43924 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
PDE6DO43924 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC13.17□□□□□ -0.3
PDE6DO43924 RARRES2P6-201ENST00000567333 442 ntBASIC13.17□□□□□ -0.3
PDE6DO43924 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC13.17□□□□□ -0.3
PDE6DO43924 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
PDE6DO43924 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC13.17□□□□□ -0.3
PDE6DO43924 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PDE6DO43924 GAMT-205ENST00000640762 751 ntTSL 5 BASIC13.17□□□□□ -0.3
PDE6DO43924 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
PDE6DO43924 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
PDE6DO43924 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
PDE6DO43924 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
PDE6DO43924 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC13.17□□□□□ -0.3
PDE6DO43924 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PDE6DO43924 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC13.17□□□□□ -0.3
PDE6DO43924 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PDE6DO43924 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC13.17□□□□□ -0.3
PDE6DO43924 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
PDE6DO43924 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms