Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC17.14■□□□□ 0.33
KDELR3O43731 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC17.14■□□□□ 0.33
KDELR3O43731 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
KDELR3O43731 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
KDELR3O43731 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
KDELR3O43731 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
KDELR3O43731 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
KDELR3O43731 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
KDELR3O43731 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC17.13■□□□□ 0.33
KDELR3O43731 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
KDELR3O43731 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC17.13■□□□□ 0.33
KDELR3O43731 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
KDELR3O43731 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
KDELR3O43731 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
KDELR3O43731 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
KDELR3O43731 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
KDELR3O43731 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
KDELR3O43731 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC17.13■□□□□ 0.33
KDELR3O43731 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
KDELR3O43731 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
KDELR3O43731 BX842568.4-201ENST00000421222 227 ntBASIC17.13■□□□□ 0.33
KDELR3O43731 MTRF1LP2-201ENST00000506027 1122 ntBASIC17.13■□□□□ 0.33
KDELR3O43731 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC17.13■□□□□ 0.33
KDELR3O43731 THTPA-204ENST00000554970 569 ntTSL 4 BASIC17.13■□□□□ 0.33
KDELR3O43731 THTPA-206ENST00000556015 535 ntTSL 3 BASIC17.13■□□□□ 0.33
KDELR3O43731 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC17.13■□□□□ 0.33
KDELR3O43731 AC068137.2-201ENST00000605408 478 ntBASIC17.13■□□□□ 0.33
KDELR3O43731 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC17.13■□□□□ 0.33
KDELR3O43731 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
KDELR3O43731 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
KDELR3O43731 AC022211.2-201ENST00000585075 2527 ntBASIC17.13■□□□□ 0.33
KDELR3O43731 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
KDELR3O43731 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
KDELR3O43731 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
KDELR3O43731 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
KDELR3O43731 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
KDELR3O43731 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
KDELR3O43731 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
KDELR3O43731 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.12■□□□□ 0.33
KDELR3O43731 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
KDELR3O43731 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
KDELR3O43731 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC17.12■□□□□ 0.33
KDELR3O43731 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
KDELR3O43731 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
KDELR3O43731 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
KDELR3O43731 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
KDELR3O43731 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
KDELR3O43731 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
KDELR3O43731 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
KDELR3O43731 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
KDELR3O43731 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
KDELR3O43731 RPP21-221ENST00000428040 594 ntTSL 2 BASIC17.12■□□□□ 0.33
KDELR3O43731 AC140658.5-201ENST00000438532 169 ntBASIC17.12■□□□□ 0.33
KDELR3O43731 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
KDELR3O43731 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC17.12■□□□□ 0.33
KDELR3O43731 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC17.12■□□□□ 0.33
KDELR3O43731 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
KDELR3O43731 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
KDELR3O43731 AP002472.1-201ENST00000577490 586 ntBASIC17.12■□□□□ 0.33
KDELR3O43731 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC17.12■□□□□ 0.33
KDELR3O43731 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC17.12■□□□□ 0.33
KDELR3O43731 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC17.12■□□□□ 0.33
KDELR3O43731 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
KDELR3O43731 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.12■□□□□ 0.33
KDELR3O43731 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.12■□□□□ 0.33
KDELR3O43731 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.12■□□□□ 0.33
KDELR3O43731 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC17.12■□□□□ 0.33
KDELR3O43731 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
KDELR3O43731 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
KDELR3O43731 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
KDELR3O43731 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
KDELR3O43731 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
KDELR3O43731 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
KDELR3O43731 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
KDELR3O43731 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
KDELR3O43731 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
KDELR3O43731 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.12■□□□□ 0.33
KDELR3O43731 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
KDELR3O43731 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
KDELR3O43731 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KDELR3O43731 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.11■□□□□ 0.33
KDELR3O43731 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
KDELR3O43731 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KDELR3O43731 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
KDELR3O43731 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
KDELR3O43731 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KDELR3O43731 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KDELR3O43731 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC17.11■□□□□ 0.33
KDELR3O43731 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
KDELR3O43731 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
KDELR3O43731 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.11■□□□□ 0.33
KDELR3O43731 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
KDELR3O43731 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
KDELR3O43731 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
KDELR3O43731 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
KDELR3O43731 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
KDELR3O43731 CDK2AP2P3-201ENST00000422476 372 ntBASIC17.11■□□□□ 0.33
KDELR3O43731 DNAJB3-201ENST00000446806 729 ntBASIC17.11■□□□□ 0.33
KDELR3O43731 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC17.11■□□□□ 0.33
KDELR3O43731 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms