Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PHGDHO43175 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC16.91■□□□□ 0.3
PHGDHO43175 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.91■□□□□ 0.3
PHGDHO43175 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC16.91■□□□□ 0.3
PHGDHO43175 AC079776.2-201ENST00000641154 1609 ntBASIC16.91■□□□□ 0.3
PHGDHO43175 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC16.91■□□□□ 0.3
PHGDHO43175 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PHGDHO43175 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PHGDHO43175 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PHGDHO43175 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PHGDHO43175 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PHGDHO43175 AC092364.2-201ENST00000596710 2692 ntBASIC16.91■□□□□ 0.3
PHGDHO43175 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
PHGDHO43175 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
PHGDHO43175 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC16.91■□□□□ 0.3
PHGDHO43175 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
PHGDHO43175 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.9■□□□□ 0.3
PHGDHO43175 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PHGDHO43175 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PHGDHO43175 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PHGDHO43175 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PHGDHO43175 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PHGDHO43175 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC16.9■□□□□ 0.3
PHGDHO43175 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.9■□□□□ 0.3
PHGDHO43175 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PHGDHO43175 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PHGDHO43175 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PHGDHO43175 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC16.9■□□□□ 0.3
PHGDHO43175 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC16.9■□□□□ 0.3
PHGDHO43175 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PHGDHO43175 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC16.9■□□□□ 0.3
PHGDHO43175 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PHGDHO43175 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC16.9■□□□□ 0.3
PHGDHO43175 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC16.9■□□□□ 0.3
PHGDHO43175 AC093458.2-201ENST00000623150 629 ntBASIC16.9■□□□□ 0.3
PHGDHO43175 AC073592.4-201ENST00000623827 446 ntBASIC16.9■□□□□ 0.3
PHGDHO43175 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC16.9■□□□□ 0.3
PHGDHO43175 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PHGDHO43175 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PHGDHO43175 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PHGDHO43175 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PHGDHO43175 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC16.9■□□□□ 0.3
PHGDHO43175 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PHGDHO43175 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PHGDHO43175 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC16.9■□□□□ 0.3
PHGDHO43175 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC16.9■□□□□ 0.3
PHGDHO43175 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.9■□□□□ 0.3
PHGDHO43175 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
PHGDHO43175 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
PHGDHO43175 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
PHGDHO43175 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
PHGDHO43175 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
PHGDHO43175 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
PHGDHO43175 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
PHGDHO43175 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PHGDHO43175 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC16.89■□□□□ 0.29
PHGDHO43175 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
PHGDHO43175 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PHGDHO43175 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC16.89■□□□□ 0.29
PHGDHO43175 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PHGDHO43175 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.89■□□□□ 0.29
PHGDHO43175 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PHGDHO43175 LINC02199-201ENST00000506655 2702 ntBASIC16.89■□□□□ 0.29
PHGDHO43175 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PHGDHO43175 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
PHGDHO43175 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PHGDHO43175 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PHGDHO43175 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
PHGDHO43175 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC16.89■□□□□ 0.29
PHGDHO43175 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC16.89■□□□□ 0.29
PHGDHO43175 FICD-205ENST00000552758 603 ntTSL 2 BASIC16.89■□□□□ 0.29
PHGDHO43175 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC16.89■□□□□ 0.29
PHGDHO43175 AL591684.3-201ENST00000605187 298 ntBASIC16.89■□□□□ 0.29
PHGDHO43175 AP001269.4-201ENST00000609611 512 ntBASIC16.89■□□□□ 0.29
PHGDHO43175 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PHGDHO43175 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PHGDHO43175 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PHGDHO43175 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
PHGDHO43175 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PHGDHO43175 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PHGDHO43175 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
PHGDHO43175 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PHGDHO43175 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
PHGDHO43175 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PHGDHO43175 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PHGDHO43175 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16.88■□□□□ 0.29
PHGDHO43175 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PHGDHO43175 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PHGDHO43175 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PHGDHO43175 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PHGDHO43175 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PHGDHO43175 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC16.88■□□□□ 0.29
PHGDHO43175 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PHGDHO43175 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PHGDHO43175 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PHGDHO43175 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PHGDHO43175 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
PHGDHO43175 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PHGDHO43175 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PHGDHO43175 BX005266.1-201ENST00000473402 457 ntBASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms