Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TMEM88BA6NKF7 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TMEM88BA6NKF7 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
TMEM88BA6NKF7 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
TMEM88BA6NKF7 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
TMEM88BA6NKF7 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TMEM88BA6NKF7 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TMEM88BA6NKF7 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC19.42■□□□□ 0.7
TMEM88BA6NKF7 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC19.42■□□□□ 0.7
TMEM88BA6NKF7 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC19.42■□□□□ 0.7
TMEM88BA6NKF7 DERL2-202ENST00000570848 657 ntTSL 5 BASIC19.42■□□□□ 0.7
TMEM88BA6NKF7 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC19.42■□□□□ 0.7
TMEM88BA6NKF7 SNX1-214ENST00000625244 324 ntTSL 5 BASIC19.42■□□□□ 0.7
TMEM88BA6NKF7 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC19.42■□□□□ 0.7
TMEM88BA6NKF7 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC19.42■□□□□ 0.7
TMEM88BA6NKF7 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC19.42■□□□□ 0.7
TMEM88BA6NKF7 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
TMEM88BA6NKF7 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
TMEM88BA6NKF7 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TMEM88BA6NKF7 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TMEM88BA6NKF7 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.42■□□□□ 0.7
TMEM88BA6NKF7 KRT8P12-202ENST00000472924 1397 ntBASIC19.42■□□□□ 0.7
TMEM88BA6NKF7 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC19.42■□□□□ 0.7
TMEM88BA6NKF7 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TMEM88BA6NKF7 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
TMEM88BA6NKF7 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC19.42■□□□□ 0.7
TMEM88BA6NKF7 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC19.41■□□□□ 0.7
TMEM88BA6NKF7 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.41■□□□□ 0.7
TMEM88BA6NKF7 FLJ13224-201ENST00000313737 1514 ntBASIC19.41■□□□□ 0.7
TMEM88BA6NKF7 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TMEM88BA6NKF7 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.41■□□□□ 0.7
TMEM88BA6NKF7 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TMEM88BA6NKF7 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TMEM88BA6NKF7 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TMEM88BA6NKF7 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
TMEM88BA6NKF7 AGER-203ENST00000375065 665 ntTSL 2 BASIC19.41■□□□□ 0.7
TMEM88BA6NKF7 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
TMEM88BA6NKF7 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC19.41■□□□□ 0.7
TMEM88BA6NKF7 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC19.41■□□□□ 0.7
TMEM88BA6NKF7 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC19.41■□□□□ 0.7
TMEM88BA6NKF7 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC19.41■□□□□ 0.7
TMEM88BA6NKF7 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC19.41■□□□□ 0.7
TMEM88BA6NKF7 AL022328.1-201ENST00000610050 478 ntBASIC19.41■□□□□ 0.7
TMEM88BA6NKF7 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC19.41■□□□□ 0.7
TMEM88BA6NKF7 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC19.41■□□□□ 0.7
TMEM88BA6NKF7 NOC2LP1-202ENST00000452600 2235 ntBASIC19.41■□□□□ 0.7
TMEM88BA6NKF7 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.41■□□□□ 0.7
TMEM88BA6NKF7 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC19.41■□□□□ 0.7
TMEM88BA6NKF7 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TMEM88BA6NKF7 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
TMEM88BA6NKF7 AC135776.1-201ENST00000319817 2481 ntBASIC19.41■□□□□ 0.7
TMEM88BA6NKF7 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TMEM88BA6NKF7 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
TMEM88BA6NKF7 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
TMEM88BA6NKF7 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC19.4■□□□□ 0.7
TMEM88BA6NKF7 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC19.4■□□□□ 0.7
TMEM88BA6NKF7 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
TMEM88BA6NKF7 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC19.4■□□□□ 0.7
TMEM88BA6NKF7 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC19.4■□□□□ 0.7
TMEM88BA6NKF7 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
TMEM88BA6NKF7 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC19.4■□□□□ 0.7
TMEM88BA6NKF7 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TMEM88BA6NKF7 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
TMEM88BA6NKF7 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TMEM88BA6NKF7 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC19.4■□□□□ 0.7
TMEM88BA6NKF7 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC19.4■□□□□ 0.7
TMEM88BA6NKF7 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TMEM88BA6NKF7 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TMEM88BA6NKF7 MIR663B-201ENST00000408361 115 ntBASIC19.4■□□□□ 0.7
TMEM88BA6NKF7 USB1-202ENST00000423271 1217 ntTSL 2 BASIC19.4■□□□□ 0.7
TMEM88BA6NKF7 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
TMEM88BA6NKF7 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC19.4■□□□□ 0.7
TMEM88BA6NKF7 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
TMEM88BA6NKF7 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC19.4■□□□□ 0.7
TMEM88BA6NKF7 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC19.4■□□□□ 0.7
TMEM88BA6NKF7 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC19.4■□□□□ 0.7
TMEM88BA6NKF7 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC19.4■□□□□ 0.7
TMEM88BA6NKF7 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC19.4■□□□□ 0.7
TMEM88BA6NKF7 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TMEM88BA6NKF7 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC19.4■□□□□ 0.7
TMEM88BA6NKF7 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TMEM88BA6NKF7 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TMEM88BA6NKF7 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TMEM88BA6NKF7 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC19.4■□□□□ 0.7
TMEM88BA6NKF7 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
TMEM88BA6NKF7 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
TMEM88BA6NKF7 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
TMEM88BA6NKF7 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
TMEM88BA6NKF7 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC19.4■□□□□ 0.7
TMEM88BA6NKF7 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.7
TMEM88BA6NKF7 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TMEM88BA6NKF7 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.39■□□□□ 0.69
TMEM88BA6NKF7 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
TMEM88BA6NKF7 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TMEM88BA6NKF7 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.39■□□□□ 0.69
TMEM88BA6NKF7 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TMEM88BA6NKF7 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC19.39■□□□□ 0.69
TMEM88BA6NKF7 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC19.39■□□□□ 0.69
TMEM88BA6NKF7 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC19.39■□□□□ 0.69
TMEM88BA6NKF7 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms