Protein–RNA interactions for Protein: A6NH52

TVP23A, Golgi apparatus membrane protein TVP23 homolog A, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23AA6NH52 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC15.19■□□□□ 0.02
TVP23AA6NH52 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TVP23AA6NH52 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TVP23AA6NH52 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TVP23AA6NH52 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC15.19■□□□□ 0.02
TVP23AA6NH52 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC15.19■□□□□ 0.02
TVP23AA6NH52 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC15.19■□□□□ 0.02
TVP23AA6NH52 AC046158.3-201ENST00000624947 2558 ntBASIC15.19■□□□□ 0.02
TVP23AA6NH52 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
TVP23AA6NH52 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
TVP23AA6NH52 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TVP23AA6NH52 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TVP23AA6NH52 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TVP23AA6NH52 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TVP23AA6NH52 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC15.19■□□□□ 0.02
TVP23AA6NH52 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TVP23AA6NH52 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC15.19■□□□□ 0.02
TVP23AA6NH52 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
TVP23AA6NH52 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
TVP23AA6NH52 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TVP23AA6NH52 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
TVP23AA6NH52 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC15.19■□□□□ 0.02
TVP23AA6NH52 NUS1P1-201ENST00000446295 882 ntBASIC15.19■□□□□ 0.02
TVP23AA6NH52 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC15.19■□□□□ 0.02
TVP23AA6NH52 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC15.19■□□□□ 0.02
TVP23AA6NH52 BET1L-206ENST00000486280 665 ntTSL 3 BASIC15.19■□□□□ 0.02
TVP23AA6NH52 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC15.19■□□□□ 0.02
TVP23AA6NH52 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC15.19■□□□□ 0.02
TVP23AA6NH52 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC15.19■□□□□ 0.02
TVP23AA6NH52 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC15.19■□□□□ 0.02
TVP23AA6NH52 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC15.19■□□□□ 0.02
TVP23AA6NH52 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TVP23AA6NH52 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC15.19■□□□□ 0.02
TVP23AA6NH52 AC099336.1-202ENST00000602961 463 ntBASIC15.19■□□□□ 0.02
TVP23AA6NH52 BCL10-202ENST00000620248 774 ntTSL 5 BASIC15.19■□□□□ 0.02
TVP23AA6NH52 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TVP23AA6NH52 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC15.19■□□□□ 0.02
TVP23AA6NH52 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TVP23AA6NH52 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TVP23AA6NH52 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TVP23AA6NH52 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TVP23AA6NH52 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC15.19■□□□□ 0.02
TVP23AA6NH52 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
TVP23AA6NH52 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC15.19■□□□□ 0.02
TVP23AA6NH52 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TVP23AA6NH52 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC15.19■□□□□ 0.02
TVP23AA6NH52 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TVP23AA6NH52 AC008894.3-201ENST00000624324 3103 ntBASIC15.19■□□□□ 0.02
TVP23AA6NH52 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TVP23AA6NH52 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC15.18■□□□□ 0.02
TVP23AA6NH52 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TVP23AA6NH52 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
TVP23AA6NH52 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
TVP23AA6NH52 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TVP23AA6NH52 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TVP23AA6NH52 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC15.18■□□□□ 0.02
TVP23AA6NH52 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
TVP23AA6NH52 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
TVP23AA6NH52 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
TVP23AA6NH52 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
TVP23AA6NH52 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
TVP23AA6NH52 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
TVP23AA6NH52 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
TVP23AA6NH52 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TVP23AA6NH52 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC15.18■□□□□ 0.02
TVP23AA6NH52 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
TVP23AA6NH52 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TVP23AA6NH52 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TVP23AA6NH52 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC15.18■□□□□ 0.02
TVP23AA6NH52 NUS1P2-201ENST00000417358 873 ntBASIC15.18■□□□□ 0.02
TVP23AA6NH52 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC15.18■□□□□ 0.02
TVP23AA6NH52 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TVP23AA6NH52 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
TVP23AA6NH52 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
TVP23AA6NH52 SRP19-202ENST00000445150 833 ntTSL 2 BASIC15.18■□□□□ 0.02
TVP23AA6NH52 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
TVP23AA6NH52 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC15.18■□□□□ 0.02
TVP23AA6NH52 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC15.18■□□□□ 0.02
TVP23AA6NH52 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC15.18■□□□□ 0.02
TVP23AA6NH52 AC092119.3-201ENST00000612618 583 ntBASIC15.18■□□□□ 0.02
TVP23AA6NH52 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC15.18■□□□□ 0.02
TVP23AA6NH52 AP000550.4-202ENST00000639755 178 ntBASIC15.18■□□□□ 0.02
TVP23AA6NH52 AP000867.4-201ENST00000641616 219 ntBASIC15.18■□□□□ 0.02
TVP23AA6NH52 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TVP23AA6NH52 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TVP23AA6NH52 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TVP23AA6NH52 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TVP23AA6NH52 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
TVP23AA6NH52 DOC2GP-204ENST00000639052 2548 ntBASIC15.18■□□□□ 0.02
TVP23AA6NH52 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TVP23AA6NH52 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TVP23AA6NH52 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TVP23AA6NH52 AC097637.2-201ENST00000624096 1997 ntBASIC15.18■□□□□ 0.02
TVP23AA6NH52 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TVP23AA6NH52 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC15.18■□□□□ 0.02
TVP23AA6NH52 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC15.18■□□□□ 0.02
TVP23AA6NH52 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
TVP23AA6NH52 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
TVP23AA6NH52 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TVP23AA6NH52 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms