Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
UBE2D4Q9Y2X8 AP003733.4-201ENST00000623785 1697 ntBASIC16.65■□□□□ 0.26
UBE2D4Q9Y2X8 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
UBE2D4Q9Y2X8 MIR219A2-201ENST00000608502 1504 ntBASIC16.65■□□□□ 0.26
UBE2D4Q9Y2X8 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
UBE2D4Q9Y2X8 EED-207ENST00000528180 1745 ntTSL 5 BASIC16.65■□□□□ 0.26
UBE2D4Q9Y2X8 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
UBE2D4Q9Y2X8 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
UBE2D4Q9Y2X8 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
UBE2D4Q9Y2X8 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC16.65■□□□□ 0.26
UBE2D4Q9Y2X8 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
UBE2D4Q9Y2X8 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
UBE2D4Q9Y2X8 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC16.65■□□□□ 0.26
UBE2D4Q9Y2X8 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
UBE2D4Q9Y2X8 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
UBE2D4Q9Y2X8 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
UBE2D4Q9Y2X8 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC16.64■□□□□ 0.25
UBE2D4Q9Y2X8 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC16.64■□□□□ 0.25
UBE2D4Q9Y2X8 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
UBE2D4Q9Y2X8 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
UBE2D4Q9Y2X8 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
UBE2D4Q9Y2X8 LINC01124-201ENST00000409786 2117 ntBASIC16.64■□□□□ 0.25
UBE2D4Q9Y2X8 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
UBE2D4Q9Y2X8 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
UBE2D4Q9Y2X8 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
UBE2D4Q9Y2X8 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC16.63■□□□□ 0.25
UBE2D4Q9Y2X8 AL359504.2-201ENST00000605506 1601 ntBASIC16.63■□□□□ 0.25
UBE2D4Q9Y2X8 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBE2D4Q9Y2X8 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBE2D4Q9Y2X8 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBE2D4Q9Y2X8 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC16.63■□□□□ 0.25
UBE2D4Q9Y2X8 AC148477.6-201ENST00000623746 465 ntBASIC16.63■□□□□ 0.25
UBE2D4Q9Y2X8 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBE2D4Q9Y2X8 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC16.63■□□□□ 0.25
UBE2D4Q9Y2X8 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBE2D4Q9Y2X8 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC16.63■□□□□ 0.25
UBE2D4Q9Y2X8 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
UBE2D4Q9Y2X8 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
UBE2D4Q9Y2X8 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
UBE2D4Q9Y2X8 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
UBE2D4Q9Y2X8 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
UBE2D4Q9Y2X8 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
UBE2D4Q9Y2X8 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC16.62■□□□□ 0.25
UBE2D4Q9Y2X8 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
UBE2D4Q9Y2X8 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
UBE2D4Q9Y2X8 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
UBE2D4Q9Y2X8 AL359258.2-201ENST00000564063 1566 ntBASIC16.61■□□□□ 0.25
UBE2D4Q9Y2X8 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC16.61■□□□□ 0.25
UBE2D4Q9Y2X8 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
UBE2D4Q9Y2X8 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC16.61■□□□□ 0.25
UBE2D4Q9Y2X8 CHST11-202ENST00000546689 756 ntTSL 2 BASIC16.61■□□□□ 0.25
UBE2D4Q9Y2X8 LINC01971-201ENST00000617888 1048 ntBASIC16.61■□□□□ 0.25
UBE2D4Q9Y2X8 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
UBE2D4Q9Y2X8 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
UBE2D4Q9Y2X8 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
UBE2D4Q9Y2X8 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
UBE2D4Q9Y2X8 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
UBE2D4Q9Y2X8 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
UBE2D4Q9Y2X8 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC16.6■□□□□ 0.25
UBE2D4Q9Y2X8 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
UBE2D4Q9Y2X8 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
UBE2D4Q9Y2X8 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC16.6■□□□□ 0.25
UBE2D4Q9Y2X8 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
UBE2D4Q9Y2X8 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
UBE2D4Q9Y2X8 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
UBE2D4Q9Y2X8 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
UBE2D4Q9Y2X8 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
UBE2D4Q9Y2X8 AC097639.1-201ENST00000565519 1891 ntBASIC16.59■□□□□ 0.25
UBE2D4Q9Y2X8 DUX4L13-201ENST00000554103 1267 ntBASIC16.59■□□□□ 0.25
UBE2D4Q9Y2X8 DUX4L15-201ENST00000611059 1267 ntBASIC16.59■□□□□ 0.25
UBE2D4Q9Y2X8 DUX4L23-201ENST00000615195 1269 ntBASIC16.59■□□□□ 0.25
UBE2D4Q9Y2X8 DUX4L24-201ENST00000617576 1269 ntBASIC16.59■□□□□ 0.25
UBE2D4Q9Y2X8 DUX4L22-201ENST00000618238 1269 ntBASIC16.59■□□□□ 0.25
UBE2D4Q9Y2X8 DUX4L20-201ENST00000619712 1269 ntBASIC16.59■□□□□ 0.25
UBE2D4Q9Y2X8 DUX4L21-201ENST00000622058 1269 ntBASIC16.59■□□□□ 0.25
UBE2D4Q9Y2X8 DUX4L10-201ENST00000622460 1267 ntBASIC16.59■□□□□ 0.25
UBE2D4Q9Y2X8 DUX4L25-201ENST00000624915 1269 ntBASIC16.59■□□□□ 0.25
UBE2D4Q9Y2X8 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
UBE2D4Q9Y2X8 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
UBE2D4Q9Y2X8 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
UBE2D4Q9Y2X8 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
UBE2D4Q9Y2X8 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
UBE2D4Q9Y2X8 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC16.59■□□□□ 0.25
UBE2D4Q9Y2X8 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
UBE2D4Q9Y2X8 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
UBE2D4Q9Y2X8 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
UBE2D4Q9Y2X8 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC16.58■□□□□ 0.25
UBE2D4Q9Y2X8 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
UBE2D4Q9Y2X8 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
UBE2D4Q9Y2X8 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
UBE2D4Q9Y2X8 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
UBE2D4Q9Y2X8 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.24
UBE2D4Q9Y2X8 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
UBE2D4Q9Y2X8 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
UBE2D4Q9Y2X8 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
UBE2D4Q9Y2X8 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
UBE2D4Q9Y2X8 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
UBE2D4Q9Y2X8 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
UBE2D4Q9Y2X8 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
UBE2D4Q9Y2X8 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms