Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 LINC01090-202ENST00000434418 560 ntTSL 5 BASIC4.86□□□□□ -1.63
KRTAP4-4Q9BYR3 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC4.86□□□□□ -1.63
KRTAP4-4Q9BYR3 AL137078.1-201ENST00000446280 404 ntTSL 2 BASIC4.86□□□□□ -1.63
KRTAP4-4Q9BYR3 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC4.86□□□□□ -1.63
KRTAP4-4Q9BYR3 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC4.86□□□□□ -1.63
KRTAP4-4Q9BYR3 AC007688.1-201ENST00000475592 759 ntBASIC4.86□□□□□ -1.63
KRTAP4-4Q9BYR3 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
KRTAP4-4Q9BYR3 S100Z-202ENST00000513010 1017 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
KRTAP4-4Q9BYR3 NRON-201ENST00000517270 370 ntBASIC4.86□□□□□ -1.63
KRTAP4-4Q9BYR3 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
KRTAP4-4Q9BYR3 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
KRTAP4-4Q9BYR3 CARD8-224ENST00000522431 622 ntTSL 2 BASIC4.86□□□□□ -1.63
KRTAP4-4Q9BYR3 AP003043.1-201ENST00000527804 547 ntTSL 4 BASIC4.86□□□□□ -1.63
KRTAP4-4Q9BYR3 NOVA1-209ENST00000547619 947 ntTSL 3 BASIC4.86□□□□□ -1.63
KRTAP4-4Q9BYR3 AC023161.1-201ENST00000549532 420 ntTSL 3 BASIC4.86□□□□□ -1.63
KRTAP4-4Q9BYR3 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC4.86□□□□□ -1.63
KRTAP4-4Q9BYR3 MTDHP1-201ENST00000605323 784 ntBASIC4.86□□□□□ -1.63
KRTAP4-4Q9BYR3 AC090506.2-201ENST00000624521 419 ntBASIC4.86□□□□□ -1.63
KRTAP4-4Q9BYR3 AC005609.4-201ENST00000625071 447 ntBASIC4.86□□□□□ -1.63
KRTAP4-4Q9BYR3 AP000720.1-201ENST00000625091 483 ntBASIC4.86□□□□□ -1.63
KRTAP4-4Q9BYR3 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
KRTAP4-4Q9BYR3 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
KRTAP4-4Q9BYR3 NIFK-AS1-202ENST00000414554 1411 ntTSL 2 BASIC4.86□□□□□ -1.63
KRTAP4-4Q9BYR3 FAM221A-201ENST00000344962 1472 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
KRTAP4-4Q9BYR3 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
KRTAP4-4Q9BYR3 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
KRTAP4-4Q9BYR3 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC4.86□□□□□ -1.63
KRTAP4-4Q9BYR3 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
KRTAP4-4Q9BYR3 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
KRTAP4-4Q9BYR3 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC4.85□□□□□ -1.63
KRTAP4-4Q9BYR3 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC4.85□□□□□ -1.63
KRTAP4-4Q9BYR3 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
KRTAP4-4Q9BYR3 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
KRTAP4-4Q9BYR3 ABHD17AP4-201ENST00000411545 909 ntBASIC4.85□□□□□ -1.63
KRTAP4-4Q9BYR3 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC4.85□□□□□ -1.63
KRTAP4-4Q9BYR3 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC4.85□□□□□ -1.63
KRTAP4-4Q9BYR3 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC4.85□□□□□ -1.63
KRTAP4-4Q9BYR3 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC4.85□□□□□ -1.63
KRTAP4-4Q9BYR3 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC4.85□□□□□ -1.63
KRTAP4-4Q9BYR3 CFLAR-212ENST00000440180 1198 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
KRTAP4-4Q9BYR3 AP006222.1-201ENST00000442116 1292 ntTSL 5 BASIC4.85□□□□□ -1.63
KRTAP4-4Q9BYR3 RNFT1P2-201ENST00000443064 757 ntBASIC4.85□□□□□ -1.63
KRTAP4-4Q9BYR3 ANKRD26P4-201ENST00000455755 950 ntBASIC4.85□□□□□ -1.63
KRTAP4-4Q9BYR3 AC004918.1-201ENST00000467537 770 ntTSL 2 BASIC4.85□□□□□ -1.63
KRTAP4-4Q9BYR3 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
KRTAP4-4Q9BYR3 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC4.85□□□□□ -1.63
KRTAP4-4Q9BYR3 NDUFC1-206ENST00000505036 809 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
KRTAP4-4Q9BYR3 AC010486.3-201ENST00000511602 785 ntBASIC4.85□□□□□ -1.63
KRTAP4-4Q9BYR3 IQCH-203ENST00000512104 1000 ntTSL 2 BASIC4.85□□□□□ -1.63
KRTAP4-4Q9BYR3 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC4.85□□□□□ -1.63
KRTAP4-4Q9BYR3 RN7SKP253-201ENST00000516424 309 ntBASIC4.85□□□□□ -1.63
KRTAP4-4Q9BYR3 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC4.85□□□□□ -1.63
KRTAP4-4Q9BYR3 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC4.85□□□□□ -1.63
KRTAP4-4Q9BYR3 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
KRTAP4-4Q9BYR3 AC022679.2-201ENST00000522186 813 ntTSL 2 BASIC4.85□□□□□ -1.63
KRTAP4-4Q9BYR3 AP000842.1-201ENST00000524467 698 ntBASIC4.85□□□□□ -1.63
KRTAP4-4Q9BYR3 LYVE1-203ENST00000529598 936 ntTSL 2 BASIC4.85□□□□□ -1.63
KRTAP4-4Q9BYR3 AP003716.1-203ENST00000533670 613 ntTSL 3 BASIC4.85□□□□□ -1.63
KRTAP4-4Q9BYR3 AP005597.1-201ENST00000534192 802 ntBASIC4.85□□□□□ -1.63
KRTAP4-4Q9BYR3 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC4.85□□□□□ -1.63
KRTAP4-4Q9BYR3 AL591767.1-201ENST00000557160 568 ntTSL 4 BASIC4.85□□□□□ -1.63
KRTAP4-4Q9BYR3 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC4.85□□□□□ -1.63
KRTAP4-4Q9BYR3 MYL12A-207ENST00000579226 947 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
KRTAP4-4Q9BYR3 AP001094.1-201ENST00000579805 193 ntBASIC4.85□□□□□ -1.63
KRTAP4-4Q9BYR3 AC005559.1-201ENST00000589661 871 ntBASIC4.85□□□□□ -1.63
KRTAP4-4Q9BYR3 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC4.85□□□□□ -1.63
KRTAP4-4Q9BYR3 MIR7108-201ENST00000614319 87 ntBASIC4.85□□□□□ -1.63
KRTAP4-4Q9BYR3 AC010435.1-201ENST00000623353 1177 ntBASIC4.85□□□□□ -1.63
KRTAP4-4Q9BYR3 AC027348.2-201ENST00000624375 642 ntBASIC4.85□□□□□ -1.63
KRTAP4-4Q9BYR3 AL109659.3-201ENST00000624985 950 ntBASIC4.85□□□□□ -1.63
KRTAP4-4Q9BYR3 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC4.85□□□□□ -1.63
KRTAP4-4Q9BYR3 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC4.85□□□□□ -1.63
KRTAP4-4Q9BYR3 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
KRTAP4-4Q9BYR3 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
KRTAP4-4Q9BYR3 ACBD7-201ENST00000356189 1322 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
KRTAP4-4Q9BYR3 AC131649.1-201ENST00000569215 1313 ntBASIC4.85□□□□□ -1.63
KRTAP4-4Q9BYR3 AC087741.3-201ENST00000624270 1347 ntBASIC4.85□□□□□ -1.63
KRTAP4-4Q9BYR3 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
KRTAP4-4Q9BYR3 LINC00888-202ENST00000471496 1490 ntTSL 3 BASIC4.85□□□□□ -1.63
KRTAP4-4Q9BYR3 AC095050.2-201ENST00000510748 1458 ntBASIC4.85□□□□□ -1.63
KRTAP4-4Q9BYR3 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
KRTAP4-4Q9BYR3 MTND5P23-201ENST00000430812 1655 ntBASIC4.85□□□□□ -1.63
KRTAP4-4Q9BYR3 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC4.85□□□□□ -1.63
KRTAP4-4Q9BYR3 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
KRTAP4-4Q9BYR3 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
KRTAP4-4Q9BYR3 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
KRTAP4-4Q9BYR3 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
KRTAP4-4Q9BYR3 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
KRTAP4-4Q9BYR3 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC4.84□□□□□ -1.63
KRTAP4-4Q9BYR3 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
KRTAP4-4Q9BYR3 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
KRTAP4-4Q9BYR3 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
KRTAP4-4Q9BYR3 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC4.84□□□□□ -1.63
KRTAP4-4Q9BYR3 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
KRTAP4-4Q9BYR3 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC4.84□□□□□ -1.63
KRTAP4-4Q9BYR3 AC008033.3-201ENST00000612531 1407 ntBASIC4.84□□□□□ -1.63
KRTAP4-4Q9BYR3 AC100757.3-201ENST00000622361 1406 ntBASIC4.84□□□□□ -1.63
KRTAP4-4Q9BYR3 SMN2-214ENST00000626847 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
KRTAP4-4Q9BYR3 LINC02318-201ENST00000553785 1334 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
KRTAP4-4Q9BYR3 FGF21-202ENST00000593756 1312 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms