Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
LRRC28Q86X40 AC012676.1-201ENST00000574705 1949 ntBASIC21.23■□□□□ 0.99
LRRC28Q86X40 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
LRRC28Q86X40 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
LRRC28Q86X40 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC21.22■□□□□ 0.99
LRRC28Q86X40 AC138932.3-201ENST00000567634 1902 ntBASIC21.22■□□□□ 0.99
LRRC28Q86X40 AC022211.4-201ENST00000625094 2161 ntBASIC21.22■□□□□ 0.99
LRRC28Q86X40 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
LRRC28Q86X40 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
LRRC28Q86X40 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
LRRC28Q86X40 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC21.22■□□□□ 0.99
LRRC28Q86X40 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
LRRC28Q86X40 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
LRRC28Q86X40 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LRRC28Q86X40 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
LRRC28Q86X40 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC21.21■□□□□ 0.99
LRRC28Q86X40 AC133561.1-201ENST00000568600 2415 ntBASIC21.21■□□□□ 0.99
LRRC28Q86X40 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LRRC28Q86X40 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC21.21■□□□□ 0.99
LRRC28Q86X40 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LRRC28Q86X40 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
LRRC28Q86X40 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
LRRC28Q86X40 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LRRC28Q86X40 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LRRC28Q86X40 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
LRRC28Q86X40 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LRRC28Q86X40 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC21.19■□□□□ 0.98
LRRC28Q86X40 CHST11-203ENST00000547956 936 ntTSL 2 BASIC21.19■□□□□ 0.98
LRRC28Q86X40 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC21.19■□□□□ 0.98
LRRC28Q86X40 AC148477.6-201ENST00000623746 465 ntBASIC21.19■□□□□ 0.98
LRRC28Q86X40 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LRRC28Q86X40 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
LRRC28Q86X40 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
LRRC28Q86X40 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LRRC28Q86X40 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
LRRC28Q86X40 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LRRC28Q86X40 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
LRRC28Q86X40 SRP68-213ENST00000629930 165 ntTSL 5 BASIC21.18■□□□□ 0.98
LRRC28Q86X40 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
LRRC28Q86X40 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LRRC28Q86X40 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
LRRC28Q86X40 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
LRRC28Q86X40 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LRRC28Q86X40 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LRRC28Q86X40 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC21.17■□□□□ 0.98
LRRC28Q86X40 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC21.17■□□□□ 0.98
LRRC28Q86X40 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LRRC28Q86X40 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
LRRC28Q86X40 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC21.16■□□□□ 0.98
LRRC28Q86X40 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LRRC28Q86X40 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LRRC28Q86X40 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
LRRC28Q86X40 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
LRRC28Q86X40 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
LRRC28Q86X40 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
LRRC28Q86X40 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC21.15■□□□□ 0.98
LRRC28Q86X40 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
LRRC28Q86X40 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
LRRC28Q86X40 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
LRRC28Q86X40 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
LRRC28Q86X40 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
LRRC28Q86X40 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
LRRC28Q86X40 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
LRRC28Q86X40 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
LRRC28Q86X40 ABHD17AP3-201ENST00000503096 1137 ntBASIC21.15■□□□□ 0.98
LRRC28Q86X40 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
LRRC28Q86X40 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
LRRC28Q86X40 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC21.14■□□□□ 0.97
LRRC28Q86X40 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC21.14■□□□□ 0.97
LRRC28Q86X40 TPT1-202ENST00000379055 948 ntTSL 2 BASIC21.14■□□□□ 0.97
LRRC28Q86X40 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
LRRC28Q86X40 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
LRRC28Q86X40 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC21.14■□□□□ 0.97
LRRC28Q86X40 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC21.13■□□□□ 0.97
LRRC28Q86X40 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
LRRC28Q86X40 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
LRRC28Q86X40 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC21.13■□□□□ 0.97
LRRC28Q86X40 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC21.13■□□□□ 0.97
LRRC28Q86X40 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
LRRC28Q86X40 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC21.13■□□□□ 0.97
LRRC28Q86X40 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
LRRC28Q86X40 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
LRRC28Q86X40 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC21.12■□□□□ 0.97
LRRC28Q86X40 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
LRRC28Q86X40 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC21.12■□□□□ 0.97
LRRC28Q86X40 MIR219A2-201ENST00000608502 1504 ntBASIC21.12■□□□□ 0.97
LRRC28Q86X40 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
LRRC28Q86X40 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
LRRC28Q86X40 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
LRRC28Q86X40 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
LRRC28Q86X40 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC21.11■□□□□ 0.97
LRRC28Q86X40 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC21.11■□□□□ 0.97
LRRC28Q86X40 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
LRRC28Q86X40 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
LRRC28Q86X40 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
LRRC28Q86X40 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC21.11■□□□□ 0.97
LRRC28Q86X40 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC21.11■□□□□ 0.97
LRRC28Q86X40 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
LRRC28Q86X40 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
LRRC28Q86X40 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 11.8 ms