Protein–RNA interactions for Protein: Q00578

SSL2, General transcription and DNA repair factor IIH helicase subunit XPB, yeastyeast

Predictions only

Length 843 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSL2Q00578 MRPS18YNL306W 654 nt6.89□□□□□ -1.31
SSL2Q00578 YNR068CYNR068C 819 nt6.89□□□□□ -1.31
SSL2Q00578 SCO2YBR024W 906 nt6.89□□□□□ -1.31
SSL2Q00578 HIR1YBL008W 2523 nt6.88□□□□□ -1.31
SSL2Q00578 YML133CYML133C 4125 nt6.88□□□□□ -1.31
SSL2Q00578 HGH1YGR187C 1185 nt6.88□□□□□ -1.31
SSL2Q00578 YHR218W-AYHR218W-A 318 nt6.88□□□□□ -1.31
SSL2Q00578 YMR147WYMR147W 672 nt6.88□□□□□ -1.31
SSL2Q00578 YBL112CYBL112C 318 nt6.88□□□□□ -1.31
SSL2Q00578 PZF1YPR186C 1290 nt6.88□□□□□ -1.31
SSL2Q00578 CHS5YLR330W 2016 nt6.88□□□□□ -1.31
SSL2Q00578 YMR279CYMR279C 1623 nt6.87□□□□□ -1.31
SSL2Q00578 GDA1YEL042W 1557 nt6.87□□□□□ -1.31
SSL2Q00578 YDR187CYDR187C 519 nt6.87□□□□□ -1.31
SSL2Q00578 MPC2YHR162W 390 nt6.87□□□□□ -1.31
SSL2Q00578 YJL107CYJL107C 1164 nt6.87□□□□□ -1.31
SSL2Q00578 YBR027CYBR027C 333 nt6.87□□□□□ -1.31
SSL2Q00578 PET20YPL159C 762 nt6.87□□□□□ -1.31
SSL2Q00578 YPR123CYPR123C 435 nt6.87□□□□□ -1.31
SSL2Q00578 YIL055CYIL055C 1884 nt6.87□□□□□ -1.31
SSL2Q00578 OPT1YJL212C 2400 nt6.87□□□□□ -1.31
SSL2Q00578 ELP3YPL086C 1674 nt6.87□□□□□ -1.31
SSL2Q00578 APM1YPL259C 1428 nt6.86□□□□□ -1.31
SSL2Q00578 RAD59YDL059C 717 nt6.86□□□□□ -1.31
SSL2Q00578 MRPS12YNR036C 462 nt6.86□□□□□ -1.31
SSL2Q00578 VMA4YOR332W 702 nt6.86□□□□□ -1.31
SSL2Q00578 ATP4YPL078C 735 nt6.86□□□□□ -1.31
SSL2Q00578 NSE5YML023C 1671 nt6.86□□□□□ -1.31
SSL2Q00578 WHI2YOR043W 1461 nt6.85□□□□□ -1.31
SSL2Q00578 MNN5YJL186W 1761 nt6.85□□□□□ -1.31
SSL2Q00578 YIL029W-AYIL029W-A 372 nt6.85□□□□□ -1.31
SSL2Q00578 ZWF1YNL241C 1518 nt6.85□□□□□ -1.31
SSL2Q00578 PAT1YCR077C 2391 nt6.84□□□□□ -1.31
SSL2Q00578 YPR196WYPR196W 1413 nt6.84□□□□□ -1.31
SSL2Q00578 VPS4YPR173C 1314 nt6.84□□□□□ -1.31
SSL2Q00578 KKQ8YKL168C 2175 nt6.84□□□□□ -1.31
SSL2Q00578 CDC34YDR054C 888 nt6.84□□□□□ -1.31
SSL2Q00578 RPN11YFR004W 921 nt6.84□□□□□ -1.31
SSL2Q00578 YMR252CYMR252C 405 nt6.84□□□□□ -1.31
SSL2Q00578 RIX7YLL034C 2514 nt6.84□□□□□ -1.31
SSL2Q00578 PRY3YJL078C 2646 nt6.83□□□□□ -1.32
SSL2Q00578 ATF1YOR377W 1578 nt6.83□□□□□ -1.32
SSL2Q00578 AFG1YEL052W 1530 nt6.83□□□□□ -1.32
SSL2Q00578 snR78snR78 87 nt6.83□□□□□ -1.32
SSL2Q00578 PIC2YER053C 903 nt6.83□□□□□ -1.32
SSL2Q00578 CUP2YGL166W 678 nt6.83□□□□□ -1.32
SSL2Q00578 RPE1YJL121C 717 nt6.83□□□□□ -1.32
SSL2Q00578 RSC2YLR357W 2670 nt6.83□□□□□ -1.32
SSL2Q00578 MTC5YDR128W 3447 nt6.82□□□□□ -1.32
SSL2Q00578 UIP5YKR044W 1332 nt6.82□□□□□ -1.32
SSL2Q00578 RSA4YCR072C 1548 nt6.82□□□□□ -1.32
SSL2Q00578 PYC1YGL062W 3537 nt6.82□□□□□ -1.32
SSL2Q00578 QCR6YFR033C 444 nt6.82□□□□□ -1.32
SSL2Q00578 YLR361C-AYLR361C-A 297 nt6.82□□□□□ -1.32
SSL2Q00578 YOL163WYOL163W 510 nt6.82□□□□□ -1.32
SSL2Q00578 GLN1YPR035W 1113 nt6.82□□□□□ -1.32
SSL2Q00578 TAE1YBR261C 699 nt6.82□□□□□ -1.32
SSL2Q00578 FRS2YFL022C 1512 nt6.81□□□□□ -1.32
SSL2Q00578 RPT3YDR394W 1287 nt6.81□□□□□ -1.32
SSL2Q00578 ECM14YHR132C 1293 nt6.81□□□□□ -1.32
SSL2Q00578 VPS24YKL041W 675 nt6.81□□□□□ -1.32
SSL2Q00578 MDM31YHR194W 1740 nt6.81□□□□□ -1.32
SSL2Q00578 CLB1YGR108W 1416 nt6.8□□□□□ -1.32
SSL2Q00578 PHB1YGR132C 864 nt6.8□□□□□ -1.32
SSL2Q00578 GPA1YHR005C 1419 nt6.8□□□□□ -1.32
SSL2Q00578 YJR084WYJR084W 1272 nt6.8□□□□□ -1.32
SSL2Q00578 OCA1YNL099C 717 nt6.8□□□□□ -1.32
SSL2Q00578 NAT5YOR253W 531 nt6.8□□□□□ -1.32
SSL2Q00578 RSM23YGL129C 1353 nt6.8□□□□□ -1.32
SSL2Q00578 RVB2YPL235W 1416 nt6.79□□□□□ -1.32
SSL2Q00578 GAA1YLR088W 1845 nt6.79□□□□□ -1.32
SSL2Q00578 RPL7AYGL076C 735 nt6.79□□□□□ -1.32
SSL2Q00578 YGL118CYGL118C 438 nt6.79□□□□□ -1.32
SSL2Q00578 RRS1YOR294W 612 nt6.79□□□□□ -1.32
SSL2Q00578 RPL7BYPL198W 735 nt6.79□□□□□ -1.32
SSL2Q00578 KEX2YNL238W 2445 nt6.79□□□□□ -1.32
SSL2Q00578 TFC6YDR362C 2019 nt6.79□□□□□ -1.32
SSL2Q00578 KTR5YNL029C 1569 nt6.78□□□□□ -1.32
SSL2Q00578 MCM3YEL032W 2916 nt6.78□□□□□ -1.32
SSL2Q00578 MRS1YIR021W 1092 nt6.78□□□□□ -1.32
SSL2Q00578 URE2YNL229C 1065 nt6.78□□□□□ -1.32
SSL2Q00578 ICE2YIL090W 1476 nt6.78□□□□□ -1.32
SSL2Q00578 SIR2YDL042C 1689 nt6.77□□□□□ -1.32
SSL2Q00578 HST3YOR025W 1344 nt6.77□□□□□ -1.32
SSL2Q00578 RPS28AYOR167C 204 nt6.77□□□□□ -1.33
SSL2Q00578 NPL6YMR091C 1308 nt6.76□□□□□ -1.33
SSL2Q00578 XBP1YIL101C 1944 nt6.76□□□□□ -1.33
SSL2Q00578 Q0144Q0144 330 nt6.76□□□□□ -1.33
SSL2Q00578 TAL1YLR354C 1008 nt6.76□□□□□ -1.33
SSL2Q00578 SPS22YCL048W 1392 nt6.76□□□□□ -1.33
SSL2Q00578 DAL4YIR028W 1908 nt6.76□□□□□ -1.33
SSL2Q00578 FRE5YOR384W 2085 nt6.75□□□□□ -1.33
SSL2Q00578 YDR387CYDR387C 1668 nt6.75□□□□□ -1.33
SSL2Q00578 CLB2YPR119W 1476 nt6.75□□□□□ -1.33
SSL2Q00578 RAD3YER171W 2337 nt6.75□□□□□ -1.33
SSL2Q00578 YHL018WYHL018W 363 nt6.75□□□□□ -1.33
SSL2Q00578 ERP2YAL007C 648 nt6.75□□□□□ -1.33
SSL2Q00578 YBL081WYBL081W 1107 nt6.75□□□□□ -1.33
SSL2Q00578 AIM41YOR215C 558 nt6.75□□□□□ -1.33
SSL2Q00578 YPR114WYPR114W 948 nt6.75□□□□□ -1.33
Retrieved 100 of 7,029 protein–RNA pairs in 18 ms