Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
UBA52P62987 HYI-213ENST00000583037 1322 ntTSL 5 BASIC20.45■□□□□ 0.86
UBA52P62987 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
UBA52P62987 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
UBA52P62987 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC20.44■□□□□ 0.86
UBA52P62987 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.44■□□□□ 0.86
UBA52P62987 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
UBA52P62987 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
UBA52P62987 AL033527.3-201ENST00000566366 1196 ntBASIC20.44■□□□□ 0.86
UBA52P62987 U85056.1-201ENST00000616429 682 ntBASIC20.44■□□□□ 0.86
UBA52P62987 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
UBA52P62987 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
UBA52P62987 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
UBA52P62987 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.44■□□□□ 0.86
UBA52P62987 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC20.44■□□□□ 0.86
UBA52P62987 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
UBA52P62987 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
UBA52P62987 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
UBA52P62987 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
UBA52P62987 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
UBA52P62987 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.43■□□□□ 0.86
UBA52P62987 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
UBA52P62987 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC20.43■□□□□ 0.86
UBA52P62987 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
UBA52P62987 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
UBA52P62987 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
UBA52P62987 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
UBA52P62987 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC20.43■□□□□ 0.86
UBA52P62987 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
UBA52P62987 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
UBA52P62987 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
UBA52P62987 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC20.43■□□□□ 0.86
UBA52P62987 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
UBA52P62987 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
UBA52P62987 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
UBA52P62987 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC20.42■□□□□ 0.86
UBA52P62987 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC20.42■□□□□ 0.86
UBA52P62987 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.42■□□□□ 0.86
UBA52P62987 AC018358.1-201ENST00000631079 1402 ntBASIC20.42■□□□□ 0.86
UBA52P62987 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
UBA52P62987 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
UBA52P62987 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
UBA52P62987 TMEM202-AS1-202ENST00000565181 2325 ntBASIC20.41■□□□□ 0.86
UBA52P62987 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC20.41■□□□□ 0.86
UBA52P62987 RPS2-210ENST00000530225 765 ntTSL 2 BASIC20.41■□□□□ 0.86
UBA52P62987 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
UBA52P62987 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC20.41■□□□□ 0.86
UBA52P62987 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC20.41■□□□□ 0.86
UBA52P62987 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC20.41■□□□□ 0.86
UBA52P62987 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
UBA52P62987 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
UBA52P62987 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
UBA52P62987 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
UBA52P62987 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
UBA52P62987 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
UBA52P62987 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
UBA52P62987 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
UBA52P62987 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
UBA52P62987 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC20.39■□□□□ 0.85
UBA52P62987 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
UBA52P62987 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
UBA52P62987 MIR219A2-201ENST00000608502 1504 ntBASIC20.38■□□□□ 0.85
UBA52P62987 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
UBA52P62987 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
UBA52P62987 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC20.38■□□□□ 0.85
UBA52P62987 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
UBA52P62987 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
UBA52P62987 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
UBA52P62987 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
UBA52P62987 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
UBA52P62987 AC079834.2-201ENST00000609776 1949 ntBASIC20.37■□□□□ 0.85
UBA52P62987 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC20.37■□□□□ 0.85
UBA52P62987 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
UBA52P62987 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
UBA52P62987 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC20.37■□□□□ 0.85
UBA52P62987 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC20.37■□□□□ 0.85
UBA52P62987 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
UBA52P62987 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
UBA52P62987 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
UBA52P62987 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
UBA52P62987 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC20.36■□□□□ 0.85
UBA52P62987 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
UBA52P62987 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
UBA52P62987 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
UBA52P62987 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
UBA52P62987 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC20.35■□□□□ 0.85
UBA52P62987 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
UBA52P62987 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
UBA52P62987 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
UBA52P62987 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
UBA52P62987 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC20.35■□□□□ 0.85
UBA52P62987 AC092296.2-201ENST00000589470 999 ntBASIC20.35■□□□□ 0.85
UBA52P62987 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
UBA52P62987 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
UBA52P62987 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
UBA52P62987 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
UBA52P62987 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
UBA52P62987 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC20.34■□□□□ 0.85
UBA52P62987 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
UBA52P62987 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 60.9 ms