Protein–RNA interactions for Protein: P43588

RPN11, Ubiquitin carboxyl-terminal hydrolase RPN11, yeastyeast

Known RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPN11P43588 YGL036WYGL036W 2730 nt7.38□□□□□ -1.23
RPN11P43588 NOB1YOR056C 1380 nt7.38□□□□□ -1.23
RPN11P43588 RRP4YHR069C 1080 nt7.38□□□□□ -1.23
RPN11P43588 POP5YAL033W 522 nt7.38□□□□□ -1.23
RPN11P43588 YDR154CYDR154C 351 nt7.37□□□□□ -1.23
RPN11P43588 GTT3YEL017W 1014 nt7.37□□□□□ -1.23
RPN11P43588 CIS3YJL158C 684 nt7.37□□□□□ -1.23
RPN11P43588 DAL82YNL314W 768 nt7.37□□□□□ -1.23
RPN11P43588 YAP1801YHR161C 1914 nt7.37□□□□□ -1.23
RPN11P43588 ALR1YOL130W 2580 nt7.36□□□□□ -1.23
RPN11P43588 PGU1YJR153W 1086 nt7.36□□□□□ -1.23
RPN11P43588 YKL151CYKL151C 1014 nt7.36□□□□□ -1.23
RPN11P43588 YLR312CYLR312C 1197 nt7.36□□□□□ -1.23
RPN11P43588 TMT1YER175C 900 nt7.35□□□□□ -1.23
RPN11P43588 PHB1YGR132C 864 nt7.35□□□□□ -1.23
RPN11P43588 YPL041CYPL041C 624 nt7.35□□□□□ -1.23
RPN11P43588 QNS1YHR074W 2145 nt7.34□□□□□ -1.23
RPN11P43588 MHR1YDR296W 681 nt7.34□□□□□ -1.23
RPN11P43588 UFD1YGR048W 1086 nt7.34□□□□□ -1.23
RPN11P43588 GAT3YLR013W 426 nt7.34□□□□□ -1.23
RPN11P43588 RPS9AYPL081W 594 nt7.34□□□□□ -1.23
RPN11P43588 SOG2YOR353C 2376 nt7.34□□□□□ -1.23
RPN11P43588 CCC2YDR270W 3015 nt7.34□□□□□ -1.23
RPN11P43588 PEX31YGR004W 1389 nt7.33□□□□□ -1.24
RPN11P43588 NDC1YML031W 1968 nt7.33□□□□□ -1.24
RPN11P43588 YGR176WYGR176W 348 nt7.33□□□□□ -1.24
RPN11P43588 RKI1YOR095C 777 nt7.33□□□□□ -1.24
RPN11P43588 CCT3YJL014W 1605 nt7.33□□□□□ -1.24
RPN11P43588 PYC2YBR218C 3543 nt7.33□□□□□ -1.24
RPN11P43588 YCL065WYCL065W 369 nt7.32□□□□□ -1.24
RPN11P43588 YRA1YDR381W 681 nt7.32□□□□□ -1.24
RPN11P43588 HDA1YNL021W 2121 nt7.32□□□□□ -1.24
RPN11P43588 YBR230W-AYBR230W-A 201 nt7.32□□□□□ -1.24
RPN11P43588 YTP1YNL237W 1380 nt7.32□□□□□ -1.24
RPN11P43588 SHM1YBR263W 1473 nt7.31□□□□□ -1.24
RPN11P43588 PRB1YEL060C 1908 nt7.31□□□□□ -1.24
RPN11P43588 CWC21YDR482C 408 nt7.31□□□□□ -1.24
RPN11P43588 RPT6YGL048C 1218 nt7.31□□□□□ -1.24
RPN11P43588 QCR8YJL166W 285 nt7.31□□□□□ -1.24
RPN11P43588 ATP14YLR295C 375 nt7.31□□□□□ -1.24
RPN11P43588 EEB1YPL095C 1371 nt7.31□□□□□ -1.24
RPN11P43588 HRQ1YDR291W 3234 nt7.3□□□□□ -1.24
RPN11P43588 MCH2YKL221W 1422 nt7.3□□□□□ -1.24
RPN11P43588 PRO3YER023W 861 nt7.3□□□□□ -1.24
RPN11P43588 IES2YNL215W 963 nt7.3□□□□□ -1.24
RPN11P43588 GLN1YPR035W 1113 nt7.3□□□□□ -1.24
RPN11P43588 YDL114WYDL114W 927 nt7.29□□□□□ -1.24
RPN11P43588 YLR123CYLR123C 330 nt7.29□□□□□ -1.24
RPN11P43588 YKR032WYKR032W 315 nt7.28□□□□□ -1.24
RPN11P43588 ICT1YLR099C 1185 nt7.28□□□□□ -1.24
RPN11P43588 ECM15YBL001C 315 nt7.28□□□□□ -1.24
RPN11P43588 YNR014WYNR014W 639 nt7.28□□□□□ -1.24
RPN11P43588 ARC35YNR035C 1029 nt7.28□□□□□ -1.24
RPN11P43588 ATG4YNL223W 1485 nt7.28□□□□□ -1.24
RPN11P43588 YOR012WYOR012W 414 nt7.27□□□□□ -1.25
RPN11P43588 YOR318CYOR318C 306 nt7.27□□□□□ -1.25
RPN11P43588 TOD6YBL054W 1578 nt7.27□□□□□ -1.25
RPN11P43588 XBP1YIL101C 1944 nt7.27□□□□□ -1.25
RPN11P43588 SLO1YER180C-A 258 nt7.26□□□□□ -1.25
RPN11P43588 tR(ACG)DtR(ACG)D 73 nt7.26□□□□□ -1.25
RPN11P43588 tR(ACG)EtR(ACG)E 73 nt7.26□□□□□ -1.25
RPN11P43588 tR(ACG)KtR(ACG)K 73 nt7.26□□□□□ -1.25
RPN11P43588 tR(ACG)LtR(ACG)L 73 nt7.26□□□□□ -1.25
RPN11P43588 tR(ACG)OtR(ACG)O 73 nt7.26□□□□□ -1.25
RPN11P43588 YJR107WYJR107W 987 nt7.26□□□□□ -1.25
RPN11P43588 YJR115WYJR115W 510 nt7.26□□□□□ -1.25
RPN11P43588 SMK1YPR054W 1167 nt7.26□□□□□ -1.25
RPN11P43588 TAH11YJR046W 1815 nt7.26□□□□□ -1.25
RPN11P43588 ORC5YNL261W 1440 nt7.26□□□□□ -1.25
RPN11P43588 RTG2YGL252C 1767 nt7.25□□□□□ -1.25
RPN11P43588 RTT106YNL206C 1368 nt7.25□□□□□ -1.25
RPN11P43588 AIM2YAL049C 741 nt7.25□□□□□ -1.25
RPN11P43588 YHM2YMR241W 945 nt7.25□□□□□ -1.25
RPN11P43588 NUD1YOR373W 2556 nt7.25□□□□□ -1.25
RPN11P43588 GPB2YAL056W 2643 nt7.24□□□□□ -1.25
RPN11P43588 COG1YGL223C 1254 nt7.24□□□□□ -1.25
RPN11P43588 NSG2YNL156C 900 nt7.24□□□□□ -1.25
RPN11P43588 SAM4YPL273W 978 nt7.24□□□□□ -1.25
RPN11P43588 MTC1YJL123C 1437 nt7.24□□□□□ -1.25
RPN11P43588 YCR097W-AYCR097W-A 267 nt7.23□□□□□ -1.25
RPN11P43588 YEA6YEL006W 1008 nt7.22□□□□□ -1.25
RPN11P43588 DYS1YHR068W 1164 nt7.22□□□□□ -1.25
RPN11P43588 YHR070C-AYHR070C-A 411 nt7.22□□□□□ -1.25
RPN11P43588 RCL1YOL010W 1104 nt7.22□□□□□ -1.25
RPN11P43588 PMT3YOR321W 2262 nt7.21□□□□□ -1.25
RPN11P43588 YDL034WYDL034W 345 nt7.21□□□□□ -1.26
RPN11P43588 PAD1YDR538W 729 nt7.21□□□□□ -1.26
RPN11P43588 BCY1YIL033C 1251 nt7.21□□□□□ -1.26
RPN11P43588 YMR119W-AYMR119W-A 375 nt7.21□□□□□ -1.26
RPN11P43588 PRC1YMR297W 1599 nt7.2□□□□□ -1.26
RPN11P43588 HSX1tR(CCU)J 72 nt7.2□□□□□ -1.26
RPN11P43588 COX16YJL003W 357 nt7.2□□□□□ -1.26
RPN11P43588 GPH1YPR160W 2709 nt7.2□□□□□ -1.26
RPN11P43588 AMD1YML035C 2433 nt7.19□□□□□ -1.26
RPN11P43588 ATG33YLR356W 594 nt7.19□□□□□ -1.26
RPN11P43588 GLE1YDL207W 1617 nt7.19□□□□□ -1.26
RPN11P43588 GUD1YDL238C 1470 nt7.18□□□□□ -1.26
RPN11P43588 GET3YDL100C 1065 nt7.18□□□□□ -1.26
RPN11P43588 IPK1YDR315C 846 nt7.18□□□□□ -1.26
RPN11P43588 SUP19tS(UGA)E 82 nt7.18□□□□□ -1.26
Retrieved 100 of 7,029 protein–RNA pairs in 44.4 ms