Protein–RNA interactions for Protein: P38854

TDA11, Topoisomerase I damage affected protein 11, yeastyeast

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TDA11P38854 MEH1YKR007W 555 nt6.02□□□□□ -1.45
TDA11P38854 RPL10YLR075W 666 nt6.02□□□□□ -1.45
TDA11P38854 YOL131WYOL131W 327 nt6.02□□□□□ -1.45
TDA11P38854 MRPL23YOR150W 492 nt6.02□□□□□ -1.45
TDA11P38854 GLN1YPR035W 1113 nt6.02□□□□□ -1.45
TDA11P38854 YTP1YNL237W 1380 nt6.02□□□□□ -1.45
TDA11P38854 CIT3YPR001W 1461 nt6.02□□□□□ -1.45
TDA11P38854 YIR007WYIR007W 2295 nt6.01□□□□□ -1.45
TDA11P38854 DBP9YLR276C 1785 nt6.01□□□□□ -1.45
TDA11P38854 LDB19YOR322C 2457 nt6.01□□□□□ -1.45
TDA11P38854 VMA3YEL027W 483 nt6.01□□□□□ -1.45
TDA11P38854 OM45YIL136W 1182 nt6.01□□□□□ -1.45
TDA11P38854 RHO4YKR055W 876 nt6.01□□□□□ -1.45
TDA11P38854 QRI5YLR204W 336 nt6.01□□□□□ -1.45
TDA11P38854 ECM31YBR176W 939 nt6.01□□□□□ -1.45
TDA11P38854 CDC1YDR182W 1476 nt6.01□□□□□ -1.45
TDA11P38854 YEL075W-AYEL075W-A 612 nt6□□□□□ -1.45
TDA11P38854 CHO1YER026C 831 nt6□□□□□ -1.45
TDA11P38854 LYS1YIR034C 1122 nt6□□□□□ -1.45
TDA11P38854 TSR2YLR435W 618 nt6□□□□□ -1.45
TDA11P38854 YLR463CYLR463C 552 nt6□□□□□ -1.45
TDA11P38854 AVO2YMR068W 1281 nt6□□□□□ -1.45
TDA11P38854 RUF23RUF23 254 nt6□□□□□ -1.45
TDA11P38854 RIM101YHL027W 1878 nt6□□□□□ -1.45
TDA11P38854 YLL067CYLL067C 3618 nt5.99□□□□□ -1.45
TDA11P38854 POR1YNL055C 852 nt5.99□□□□□ -1.45
TDA11P38854 ATP4YPL078C 735 nt5.99□□□□□ -1.45
TDA11P38854 YMC1YPR058W 924 nt5.99□□□□□ -1.45
TDA11P38854 ARE2YNR019W 1929 nt5.99□□□□□ -1.45
TDA11P38854 EHD3YDR036C 1503 nt5.99□□□□□ -1.45
TDA11P38854 GAT1YFL021W 1533 nt5.99□□□□□ -1.45
TDA11P38854 YHK8YHR048W 1545 nt5.99□□□□□ -1.45
TDA11P38854 TBF1YPL128C 1689 nt5.98□□□□□ -1.45
TDA11P38854 TFG2YGR005C 1203 nt5.98□□□□□ -1.45
TDA11P38854 YML018CYML018C 1182 nt5.98□□□□□ -1.45
TDA11P38854 OSW2YLR054C 2175 nt5.97□□□□□ -1.45
TDA11P38854 TRP3YKL211C 1455 nt5.97□□□□□ -1.45
TDA11P38854 RPT3YDR394W 1287 nt5.97□□□□□ -1.45
TDA11P38854 RPN11YFR004W 921 nt5.97□□□□□ -1.45
TDA11P38854 HGH1YGR187C 1185 nt5.97□□□□□ -1.45
TDA11P38854 YMR122CYMR122C 375 nt5.97□□□□□ -1.45
TDA11P38854 RNH1YMR234W 1047 nt5.97□□□□□ -1.45
TDA11P38854 RET1YOR207C 3450 nt5.97□□□□□ -1.45
TDA11P38854 PYC1YGL062W 3537 nt5.97□□□□□ -1.45
TDA11P38854 GPB2YAL056W 2643 nt5.96□□□□□ -1.45
TDA11P38854 TAL1YLR354C 1008 nt5.96□□□□□ -1.46
TDA11P38854 YMR119W-AYMR119W-A 375 nt5.96□□□□□ -1.46
TDA11P38854 RGT2YDL138W 2292 nt5.96□□□□□ -1.46
TDA11P38854 RRP9YPR137W 1722 nt5.96□□□□□ -1.46
TDA11P38854 YDR187CYDR187C 519 nt5.95□□□□□ -1.46
TDA11P38854 FZF1YGL254W 900 nt5.95□□□□□ -1.46
TDA11P38854 YRB2YIL063C 984 nt5.95□□□□□ -1.46
TDA11P38854 MHT1YLL062C 975 nt5.95□□□□□ -1.46
TDA11P38854 GUD1YDL238C 1470 nt5.95□□□□□ -1.46
TDA11P38854 EXG1YLR300W 1347 nt5.95□□□□□ -1.46
TDA11P38854 SHO1YER118C 1104 nt5.94□□□□□ -1.46
TDA11P38854 CUP2YGL166W 678 nt5.94□□□□□ -1.46
TDA11P38854 SUP2tY(GUA)D 75 nt5.94□□□□□ -1.46
TDA11P38854 SUP11tY(GUA)F1 75 nt5.94□□□□□ -1.46
TDA11P38854 SUP6tY(GUA)F2 75 nt5.94□□□□□ -1.46
TDA11P38854 SUP7tY(GUA)J1 75 nt5.94□□□□□ -1.46
TDA11P38854 SUP4tY(GUA)J2 75 nt5.94□□□□□ -1.46
TDA11P38854 SUP5tY(GUA)M1 75 nt5.94□□□□□ -1.46
TDA11P38854 SUP8tY(GUA)M2 75 nt5.94□□□□□ -1.46
TDA11P38854 SUP3tY(GUA)O 75 nt5.94□□□□□ -1.46
TDA11P38854 YKL102CYKL102C 306 nt5.94□□□□□ -1.46
TDA11P38854 YKR045CYKR045C 552 nt5.94□□□□□ -1.46
TDA11P38854 FSF1YOR271C 984 nt5.94□□□□□ -1.46
TDA11P38854 YBR124WYBR124W 360 nt5.94□□□□□ -1.46
TDA11P38854 YCK1YHR135C 1617 nt5.93□□□□□ -1.46
TDA11P38854 YBR027CYBR027C 333 nt5.93□□□□□ -1.46
TDA11P38854 YBR226CYBR226C 411 nt5.93□□□□□ -1.46
TDA11P38854 GPD2YOL059W 1323 nt5.93□□□□□ -1.46
TDA11P38854 GFA1YKL104C 2154 nt5.93□□□□□ -1.46
TDA11P38854 MAK32YCR019W 1092 nt5.92□□□□□ -1.46
TDA11P38854 YLR296WYLR296W 327 nt5.92□□□□□ -1.46
TDA11P38854 GDA1YEL042W 1557 nt5.92□□□□□ -1.46
TDA11P38854 ATP1YBL099W 1638 nt5.92□□□□□ -1.46
TDA11P38854 AMD2YDR242W 1650 nt5.91□□□□□ -1.46
TDA11P38854 VTC2YFL004W 2487 nt5.91□□□□□ -1.46
TDA11P38854 MSP1YGR028W 1089 nt5.91□□□□□ -1.46
TDA11P38854 YHR213W-BYHR213W-B 300 nt5.91□□□□□ -1.46
TDA11P38854 TDH2YJR009C 999 nt5.91□□□□□ -1.46
TDA11P38854 NPA3YJR072C 1158 nt5.91□□□□□ -1.46
TDA11P38854 YAR064WYAR064W 300 nt5.91□□□□□ -1.46
TDA11P38854 YNL017CYNL017C 339 nt5.91□□□□□ -1.46
TDA11P38854 CPA1YOR303W 1236 nt5.91□□□□□ -1.46
TDA11P38854 TAE1YBR261C 699 nt5.91□□□□□ -1.46
TDA11P38854 YAP1801YHR161C 1914 nt5.91□□□□□ -1.46
TDA11P38854 AIM3YBR108W 2844 nt5.9□□□□□ -1.46
TDA11P38854 ROG3YFR022W 2202 nt5.9□□□□□ -1.46
TDA11P38854 UBA1YKL210W 3075 nt5.9□□□□□ -1.46
TDA11P38854 VCX1YDL128W 1236 nt5.9□□□□□ -1.46
TDA11P38854 PFA3YNL326C 1011 nt5.9□□□□□ -1.46
TDA11P38854 FRS2YFL022C 1512 nt5.89□□□□□ -1.47
TDA11P38854 KKQ8YKL168C 2175 nt5.89□□□□□ -1.47
TDA11P38854 ASH1YKL185W 1767 nt5.89□□□□□ -1.47
TDA11P38854 SCS7YMR272C 1155 nt5.89□□□□□ -1.47
TDA11P38854 CTF19YPL018W 1110 nt5.89□□□□□ -1.47
TDA11P38854 MRP51YPL118W 1035 nt5.89□□□□□ -1.47
Retrieved 100 of 7,029 protein–RNA pairs in 13.5 ms