Protein–RNA interactions for Protein: P24046

GABRR1, Gamma-aminobutyric acid receptor subunit rho-1, humanhuman

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRR1P24046 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
GABRR1P24046 MED25-210ENST00000612854 801 ntTSL 5 BASIC20.52■□□□□ 0.88
GABRR1P24046 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
GABRR1P24046 MED25-214ENST00000622402 642 ntTSL 5 BASIC20.52■□□□□ 0.88
GABRR1P24046 AC093323.1-202ENST00000635031 2045 ntBASIC20.52■□□□□ 0.88
GABRR1P24046 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
GABRR1P24046 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
GABRR1P24046 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
GABRR1P24046 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
GABRR1P24046 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
GABRR1P24046 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
GABRR1P24046 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
GABRR1P24046 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
GABRR1P24046 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
GABRR1P24046 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
GABRR1P24046 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
GABRR1P24046 AL359504.2-201ENST00000605506 1601 ntBASIC20.5■□□□□ 0.87
GABRR1P24046 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
GABRR1P24046 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
GABRR1P24046 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
GABRR1P24046 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
GABRR1P24046 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC20.5■□□□□ 0.87
GABRR1P24046 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
GABRR1P24046 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
GABRR1P24046 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
GABRR1P24046 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
GABRR1P24046 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
GABRR1P24046 AC096887.2-201ENST00000623443 1957 ntBASIC20.5■□□□□ 0.87
GABRR1P24046 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
GABRR1P24046 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC20.49■□□□□ 0.87
GABRR1P24046 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
GABRR1P24046 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
GABRR1P24046 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
GABRR1P24046 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
GABRR1P24046 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC20.49■□□□□ 0.87
GABRR1P24046 AC142381.3-201ENST00000568208 1670 ntBASIC20.48■□□□□ 0.87
GABRR1P24046 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC20.48■□□□□ 0.87
GABRR1P24046 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
GABRR1P24046 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
GABRR1P24046 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
GABRR1P24046 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
GABRR1P24046 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
GABRR1P24046 TPT1-202ENST00000379055 948 ntTSL 2 BASIC20.47■□□□□ 0.87
GABRR1P24046 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC20.47■□□□□ 0.87
GABRR1P24046 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC20.47■□□□□ 0.87
GABRR1P24046 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC20.47■□□□□ 0.87
GABRR1P24046 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC20.47■□□□□ 0.87
GABRR1P24046 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
GABRR1P24046 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
GABRR1P24046 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
GABRR1P24046 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC20.46■□□□□ 0.87
GABRR1P24046 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC20.46■□□□□ 0.87
GABRR1P24046 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC20.46■□□□□ 0.87
GABRR1P24046 AC022211.4-201ENST00000625094 2161 ntBASIC20.46■□□□□ 0.87
GABRR1P24046 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC20.46■□□□□ 0.87
GABRR1P24046 MED17-227ENST00000640521 2047 ntTSL 5 BASIC20.46■□□□□ 0.87
GABRR1P24046 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC20.45■□□□□ 0.86
GABRR1P24046 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
GABRR1P24046 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
GABRR1P24046 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
GABRR1P24046 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
GABRR1P24046 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
GABRR1P24046 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC20.44■□□□□ 0.86
GABRR1P24046 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
GABRR1P24046 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
GABRR1P24046 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
GABRR1P24046 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC20.44■□□□□ 0.86
GABRR1P24046 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
GABRR1P24046 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
GABRR1P24046 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
GABRR1P24046 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC20.43■□□□□ 0.86
GABRR1P24046 MBP-237ENST00000579129 1052 ntTSL 5 BASIC20.43■□□□□ 0.86
GABRR1P24046 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
GABRR1P24046 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
GABRR1P24046 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
GABRR1P24046 AC138932.3-201ENST00000567634 1902 ntBASIC20.42■□□□□ 0.86
GABRR1P24046 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
GABRR1P24046 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
GABRR1P24046 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
GABRR1P24046 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
GABRR1P24046 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
GABRR1P24046 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
GABRR1P24046 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC20.41■□□□□ 0.86
GABRR1P24046 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
GABRR1P24046 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.41■□□□□ 0.86
GABRR1P24046 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
GABRR1P24046 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC20.41■□□□□ 0.86
GABRR1P24046 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
GABRR1P24046 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
GABRR1P24046 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
GABRR1P24046 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
GABRR1P24046 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC20.4■□□□□ 0.86
GABRR1P24046 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC20.4■□□□□ 0.86
GABRR1P24046 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
GABRR1P24046 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
GABRR1P24046 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC20.39■□□□□ 0.86
GABRR1P24046 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
GABRR1P24046 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC20.39■□□□□ 0.85
GABRR1P24046 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
GABRR1P24046 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms