Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC22.54■■□□□ 1.2
MT-ND1P03886 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
MT-ND1P03886 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
MT-ND1P03886 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC22.53■■□□□ 1.2
MT-ND1P03886 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
MT-ND1P03886 CHML-204ENST00000638121 920 ntTSL 2 BASIC22.53■■□□□ 1.2
MT-ND1P03886 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
MT-ND1P03886 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.2
MT-ND1P03886 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
MT-ND1P03886 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
MT-ND1P03886 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC22.51■■□□□ 1.19
MT-ND1P03886 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
MT-ND1P03886 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC22.51■■□□□ 1.19
MT-ND1P03886 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
MT-ND1P03886 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
MT-ND1P03886 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
MT-ND1P03886 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
MT-ND1P03886 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
MT-ND1P03886 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
MT-ND1P03886 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
MT-ND1P03886 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
MT-ND1P03886 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
MT-ND1P03886 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
MT-ND1P03886 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
MT-ND1P03886 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
MT-ND1P03886 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
MT-ND1P03886 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
MT-ND1P03886 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
MT-ND1P03886 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC22.49■■□□□ 1.19
MT-ND1P03886 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
MT-ND1P03886 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
MT-ND1P03886 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
MT-ND1P03886 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
MT-ND1P03886 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC22.48■■□□□ 1.19
MT-ND1P03886 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC22.48■■□□□ 1.19
MT-ND1P03886 LINC01124-201ENST00000409786 2117 ntBASIC22.48■■□□□ 1.19
MT-ND1P03886 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC22.48■■□□□ 1.19
MT-ND1P03886 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC22.48■■□□□ 1.19
MT-ND1P03886 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC22.48■■□□□ 1.19
MT-ND1P03886 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
MT-ND1P03886 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
MT-ND1P03886 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC22.48■■□□□ 1.19
MT-ND1P03886 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC22.47■■□□□ 1.19
MT-ND1P03886 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
MT-ND1P03886 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
MT-ND1P03886 DUX4L13-201ENST00000554103 1267 ntBASIC22.47■■□□□ 1.19
MT-ND1P03886 DUX4L15-201ENST00000611059 1267 ntBASIC22.47■■□□□ 1.19
MT-ND1P03886 DUX4L23-201ENST00000615195 1269 ntBASIC22.47■■□□□ 1.19
MT-ND1P03886 DUX4L24-201ENST00000617576 1269 ntBASIC22.47■■□□□ 1.19
MT-ND1P03886 DUX4L22-201ENST00000618238 1269 ntBASIC22.47■■□□□ 1.19
MT-ND1P03886 DUX4L20-201ENST00000619712 1269 ntBASIC22.47■■□□□ 1.19
MT-ND1P03886 DUX4L21-201ENST00000622058 1269 ntBASIC22.47■■□□□ 1.19
MT-ND1P03886 DUX4L10-201ENST00000622460 1267 ntBASIC22.47■■□□□ 1.19
MT-ND1P03886 DUX4L25-201ENST00000624915 1269 ntBASIC22.47■■□□□ 1.19
MT-ND1P03886 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC22.47■■□□□ 1.19
MT-ND1P03886 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
MT-ND1P03886 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC22.47■■□□□ 1.19
MT-ND1P03886 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC22.46■■□□□ 1.19
MT-ND1P03886 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
MT-ND1P03886 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
MT-ND1P03886 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
MT-ND1P03886 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
MT-ND1P03886 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC22.45■■□□□ 1.18
MT-ND1P03886 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
MT-ND1P03886 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC22.45■■□□□ 1.18
MT-ND1P03886 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC22.45■■□□□ 1.18
MT-ND1P03886 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC22.45■■□□□ 1.18
MT-ND1P03886 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
MT-ND1P03886 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC22.45■■□□□ 1.18
MT-ND1P03886 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC22.44■■□□□ 1.18
MT-ND1P03886 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC22.44■■□□□ 1.18
MT-ND1P03886 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC22.44■■□□□ 1.18
MT-ND1P03886 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
MT-ND1P03886 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
MT-ND1P03886 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
MT-ND1P03886 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
MT-ND1P03886 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
MT-ND1P03886 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC22.43■■□□□ 1.18
MT-ND1P03886 MLEC-202ENST00000412616 841 ntTSL 3 BASIC22.43■■□□□ 1.18
MT-ND1P03886 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
MT-ND1P03886 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
MT-ND1P03886 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC22.43■■□□□ 1.18
MT-ND1P03886 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
MT-ND1P03886 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC22.42■■□□□ 1.18
MT-ND1P03886 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
MT-ND1P03886 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
MT-ND1P03886 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
MT-ND1P03886 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC22.42■■□□□ 1.18
MT-ND1P03886 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC22.42■■□□□ 1.18
MT-ND1P03886 DUX4L11-201ENST00000611504 1267 ntBASIC22.42■■□□□ 1.18
MT-ND1P03886 DUX4L12-201ENST00000614593 1267 ntBASIC22.42■■□□□ 1.18
MT-ND1P03886 DUX4L14-201ENST00000621227 1267 ntBASIC22.42■■□□□ 1.18
MT-ND1P03886 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC22.42■■□□□ 1.18
MT-ND1P03886 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
MT-ND1P03886 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
MT-ND1P03886 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
MT-ND1P03886 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
MT-ND1P03886 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
MT-ND1P03886 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
MT-ND1P03886 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 126.8 ms