Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RCL1Q9Y2P8 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
RCL1Q9Y2P8 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
RCL1Q9Y2P8 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC13.92□□□□□ -0.18
RCL1Q9Y2P8 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC13.92□□□□□ -0.18
RCL1Q9Y2P8 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RCL1Q9Y2P8 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
RCL1Q9Y2P8 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
RCL1Q9Y2P8 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
RCL1Q9Y2P8 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RCL1Q9Y2P8 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC13.92□□□□□ -0.18
RCL1Q9Y2P8 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC13.92□□□□□ -0.18
RCL1Q9Y2P8 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC13.92□□□□□ -0.18
RCL1Q9Y2P8 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RCL1Q9Y2P8 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RCL1Q9Y2P8 COX5BP2-201ENST00000392354 334 ntBASIC13.92□□□□□ -0.18
RCL1Q9Y2P8 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RCL1Q9Y2P8 DDT-203ENST00000403754 569 ntTSL 3 BASIC13.92□□□□□ -0.18
RCL1Q9Y2P8 DDT-206ENST00000430101 573 ntTSL 2 BASIC13.92□□□□□ -0.18
RCL1Q9Y2P8 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC13.92□□□□□ -0.18
RCL1Q9Y2P8 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
RCL1Q9Y2P8 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC13.92□□□□□ -0.18
RCL1Q9Y2P8 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC13.92□□□□□ -0.18
RCL1Q9Y2P8 AC104640.1-201ENST00000562617 2109 ntBASIC13.92□□□□□ -0.18
RCL1Q9Y2P8 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
RCL1Q9Y2P8 AC019129.2-201ENST00000609837 1235 ntBASIC13.92□□□□□ -0.18
RCL1Q9Y2P8 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC13.92□□□□□ -0.18
RCL1Q9Y2P8 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC13.92□□□□□ -0.18
RCL1Q9Y2P8 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC13.92□□□□□ -0.18
RCL1Q9Y2P8 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
RCL1Q9Y2P8 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RCL1Q9Y2P8 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RCL1Q9Y2P8 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RCL1Q9Y2P8 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RCL1Q9Y2P8 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
RCL1Q9Y2P8 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
RCL1Q9Y2P8 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC13.92□□□□□ -0.18
RCL1Q9Y2P8 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC13.92□□□□□ -0.18
RCL1Q9Y2P8 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC13.92□□□□□ -0.18
RCL1Q9Y2P8 AC006538.1-201ENST00000567905 1585 ntBASIC13.92□□□□□ -0.18
RCL1Q9Y2P8 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RCL1Q9Y2P8 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RCL1Q9Y2P8 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RCL1Q9Y2P8 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
RCL1Q9Y2P8 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RCL1Q9Y2P8 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RCL1Q9Y2P8 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RCL1Q9Y2P8 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RCL1Q9Y2P8 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC13.91□□□□□ -0.18
RCL1Q9Y2P8 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RCL1Q9Y2P8 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC13.91□□□□□ -0.18
RCL1Q9Y2P8 AC067930.6-201ENST00000623257 4947 ntBASIC13.91□□□□□ -0.18
RCL1Q9Y2P8 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
RCL1Q9Y2P8 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RCL1Q9Y2P8 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RCL1Q9Y2P8 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC13.91□□□□□ -0.18
RCL1Q9Y2P8 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
RCL1Q9Y2P8 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RCL1Q9Y2P8 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
RCL1Q9Y2P8 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC13.91□□□□□ -0.18
RCL1Q9Y2P8 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC13.91□□□□□ -0.18
RCL1Q9Y2P8 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RCL1Q9Y2P8 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RCL1Q9Y2P8 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC13.91□□□□□ -0.18
RCL1Q9Y2P8 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
RCL1Q9Y2P8 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RCL1Q9Y2P8 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
RCL1Q9Y2P8 ID1-201ENST00000376105 1233 ntBASIC13.91□□□□□ -0.18
RCL1Q9Y2P8 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RCL1Q9Y2P8 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC13.91□□□□□ -0.18
RCL1Q9Y2P8 MTCL1P1-201ENST00000446207 792 ntBASIC13.91□□□□□ -0.18
RCL1Q9Y2P8 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC13.91□□□□□ -0.18
RCL1Q9Y2P8 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC13.91□□□□□ -0.18
RCL1Q9Y2P8 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC13.91□□□□□ -0.18
RCL1Q9Y2P8 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC13.91□□□□□ -0.18
RCL1Q9Y2P8 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RCL1Q9Y2P8 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC13.91□□□□□ -0.18
RCL1Q9Y2P8 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC13.91□□□□□ -0.18
RCL1Q9Y2P8 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC13.91□□□□□ -0.18
RCL1Q9Y2P8 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC13.91□□□□□ -0.18
RCL1Q9Y2P8 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
RCL1Q9Y2P8 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RCL1Q9Y2P8 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RCL1Q9Y2P8 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
RCL1Q9Y2P8 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC13.91□□□□□ -0.18
RCL1Q9Y2P8 AC092384.3-202ENST00000564646 2873 ntBASIC13.91□□□□□ -0.18
RCL1Q9Y2P8 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RCL1Q9Y2P8 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RCL1Q9Y2P8 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RCL1Q9Y2P8 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RCL1Q9Y2P8 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
RCL1Q9Y2P8 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
RCL1Q9Y2P8 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
RCL1Q9Y2P8 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
RCL1Q9Y2P8 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
RCL1Q9Y2P8 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC13.9□□□□□ -0.18
RCL1Q9Y2P8 TBC1D3P5-201ENST00000579401 1545 ntBASIC13.9□□□□□ -0.18
RCL1Q9Y2P8 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RCL1Q9Y2P8 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RCL1Q9Y2P8 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms